LGR6 leucine rich repeat containing G protein-coupled receptor 6
Information
- Symbol
- LGR6
- Type
- protein-coding
- Description
- leucine rich repeat containing G protein-coupled receptor 6
- Entrez Gene ID
- 59352
- Genome
- hg19
- Position
- chr1:202,162,927-202,288,889
- Genome
- hg38
- Position
- chr1:202,193,799-202,319,761
- MIM
- 606653 OMIM
- HGNC
- HGNC:19719 HGNC
- Ensembl
- ENSG00000133067 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Benign | 0 | 10 |
| Likely benign | 0 | 10 |
| Uncertain significance | 0 | 114 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
2 |
 |
130 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
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MGeND data only
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| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | GPCR |
| SYNONYM | VTS20631 |
| MIM | 606653 OMIM |
| HGNC | HGNC:19719 HGNC |
| Ensembl | ENSG00000133067 Ensembl |
| AllianceGenome | HGNC:19719 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000439764.2 | hg38 | chr1 | 202,214,155 | 202,319,207 | 105,053 |
| ENST00000367278.8 | hg38 | chr1 | 202,193,799 | 202,319,761 | 125,963 |
| ENST00000255432.11 | hg38 | chr1 | 202,203,736 | 202,319,781 | 116,046 |
| ENST00000367278.8 | hg19 | chr1 | 202,162,927 | 202,288,889 | 125,963 |
| ENST00000255432.11 | hg19 | chr1 | 202,172,864 | 202,288,909 | 116,046 |
| ENST00000439764.2 | hg19 | chr1 | 202,183,283 | 202,288,335 | 105,053 |
| Key | Value |
|---|---|
| strand | + |
| UniProt | TSG |
| start | 202,163,117 |
| Gene Symbol | LGR6 |
| Entrez GeneId | 59,352 |
| Chr Band | 1q32.1 |
| end | 202,288,888 |
| chr | chr1 |
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