SAA1 serum amyloid A1
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Benign | 0 | 10 |
| Likely benign | 0 | 12 |
| Uncertain significance | 0 | 20 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
2 |
 |
38 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | PIG4 |
| SYNONYM | SAA |
| SYNONYM | SAA2 |
| SYNONYM | TP53I4 |
| MIM | 104750 OMIM |
| HGNC | HGNC:10513 HGNC |
| Ensembl | ENSG00000173432 Ensembl |
| AllianceGenome | HGNC:10513 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000532858.5 | hg38 | chr11 | 18,266,260 | 18,269,967 | 3,708 |
| ENST00000405158.2 | hg38 | chr11 | 18,266,264 | 18,269,977 | 3,714 |
| ENST00000649195.1 | hg38 | chr11 | 18,266,261 | 18,269,962 | 3,702 |
| ENST00000356524.9 | hg38 | chr11 | 18,266,264 | 18,269,967 | 3,704 |
| ENST00000689650.1 | hg38 | chr11 | 18,266,261 | 18,269,967 | 3,707 |
| ENST00000532858.5 | hg19 | chr11 | 18,287,807 | 18,291,514 | 3,708 |
| ENST00000649195.1 | hg19 | chr11 | 18,287,808 | 18,291,509 | 3,702 |
| ENST00000689650.1 | hg19 | chr11 | 18,287,808 | 18,291,514 | 3,707 |
| ENST00000356524.9 | hg19 | chr11 | 18,287,811 | 18,291,514 | 3,704 |
| ENST00000405158.2 | hg19 | chr11 | 18,287,811 | 18,291,524 | 3,714 |
Genome browser