MSH2-OT1 MSH2 overlapping transcript 1

Information
Symbol
MSH2-OT1
Type
ncRNA
Description
MSH2 overlapping transcript 1
Entrez Gene ID
644093
Genome
hg19
Position
chr2:47,754,147-47,756,303
Genome
hg38
Position
chr2:47,527,008-47,529,164
HGNC
HGNC:40319 HGNC
Ensembl
ENSG00000235760 Ensembl
Links
NCBI Gene Cards OncoKB
Clinical Significance
MGeND ClinVar
Ranking
ClinVar
0
0
0
0
0
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
TypeID
SYNONYM HCG2040054
HGNC HGNC:40319 HGNC
Ensembl ENSG00000235760 Ensembl
AllianceGenome HGNC:40319
DescrptionSourceLinks
IDGenomeChromosomeStartEndLength
ENST00000648301.1 hg38 chr2 47,527,008 47,529,164 2,157
ENST00000435331.3 hg38 chr2 47,527,537 47,529,164 1,628
ENST00000648301.1 hg19 chr2 47,754,147 47,756,303 2,157
ENST00000435331.3 hg19 chr2 47,754,676 47,756,303 1,628
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