LINC00520 long intergenic non-protein coding RNA 520
Information
- Symbol
- LINC00520
- Type
- ncRNA
- Description
- long intergenic non-protein coding RNA 520
- Entrez Gene ID
- 645687
- Genome
- hg19
- Position
- chr14:56,247,855-56,263,409
- Genome
- hg38
- Position
- chr14:55,781,137-55,796,691
- MIM
- 620533 OMIM
- HGNC
- HGNC:19843 HGNC
- Ensembl
- ENSG00000258791 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar |
|---|
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
0 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | C14orf34 |
| SYNONYM | LASSIE |
| SYNONYM | LEENE |
| SYNONYM | LncRNA00520 |
| MIM | 620533 OMIM |
| HGNC | HGNC:19843 HGNC |
| Ensembl | ENSG00000258791 Ensembl |
| AllianceGenome | HGNC:19843 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000649691.1 | hg38 | chr14 | 55,781,137 | 55,796,691 | 15,555 |
| ENST00000554221.7 | hg38 | chr14 | 55,782,411 | 55,796,688 | 14,278 |
| ENST00000650527.1 | hg38 | chr14 | 55,781,139 | 55,796,686 | 15,548 |
| ENST00000649691.1 | hg19 | chr14 | 56,247,855 | 56,263,409 | 15,555 |
| ENST00000650527.1 | hg19 | chr14 | 56,247,857 | 56,263,404 | 15,548 |
| ENST00000554221.7 | hg19 | chr14 | 56,249,129 | 56,263,406 | 14,278 |
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