SLC6A9 solute carrier family 6 member 9

Information
Symbol
SLC6A9
Type
protein-coding
Description
solute carrier family 6 member 9
Entrez Gene ID
6536
Genome
hg19
Position
chr1:44,463,200-44,482,997
Genome
hg38
Position
chr1:43,997,528-44,017,325
MIM
601019 OMIM
HGNC
HGNC:11056 HGNC
Ensembl
ENSG00000196517 Ensembl
Links
NCBI Gene Cards OncoKB
Clinical Significance
MGeND ClinVar
Pathogenic 0 8
Likely pathogenic 0 10
Benign 0 68
Likely benign 0 260
Conflicting classifications of pathogenicity 0 4
not provided 1 0
Uncertain significance 0 244
Ranking
ClinVar
0
0
44
536
8
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
TypeID
SYNONYM GCENSG
SYNONYM GLYT1
MIM 601019 OMIM
HGNC HGNC:11056 HGNC
Ensembl ENSG00000196517 Ensembl
AllianceGenome HGNC:11056
DescrptionSourceLinks
IDGenomeChromosomeStartEndLength
ENST00000357730.6 hg38 chr1 43,997,528 44,017,325 19,798
ENST00000475075.6 hg38 chr1 43,997,443 44,031,386 33,944
ENST00000360584.6 hg38 chr1 43,997,528 44,017,325 19,798
ENST00000673836.1 hg38 chr1 43,996,503 44,031,177 34,675
ENST00000372310.8 hg38 chr1 43,996,483 44,031,462 34,980
ENST00000372307.7 hg38 chr1 43,991,500 44,016,556 25,057
ENST00000372306.7 hg38 chr1 43,991,831 44,031,360 39,530
ENST00000372307.7 hg19 chr1 44,457,172 44,482,228 25,057
ENST00000372306.7 hg19 chr1 44,457,503 44,497,032 39,530
ENST00000372310.8 hg19 chr1 44,462,155 44,497,134 34,980
ENST00000673836.1 hg19 chr1 44,462,175 44,496,849 34,675
ENST00000475075.6 hg19 chr1 44,463,115 44,497,058 33,944
ENST00000357730.6 hg19 chr1 44,463,200 44,482,997 19,798
ENST00000360584.6 hg19 chr1 44,463,200 44,482,997 19,798
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