SORL1 sortilin related receptor 1
Information
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Pathogenic | 0 | 20 |
| Likely pathogenic | 0 | 4 |
| Benign | 60 | 176 |
| Likely benign | 0 | 386 |
| Conflicting classifications of pathogenicity | 0 | 28 |
| not provided | 9 | 0 |
| risk factor | 0 | 2 |
| Uncertain significance | 0 | 680 |
Ranking
| ClinVar | |
|---|---|
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0 |
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0 |
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114 |
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1,122 |
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6 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
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Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
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MGeND data only
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| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | C11orf32 |
| SYNONYM | LR11 |
| SYNONYM | LRP9 |
| SYNONYM | SORLA |
| SYNONYM | SorLA-1 |
| SYNONYM | gp250 |
| MIM | 602005 OMIM |
| HGNC | HGNC:11185 HGNC |
| Ensembl | ENSG00000137642 Ensembl |
| AllianceGenome | HGNC:11185 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000527934.1 | hg38 | chr11 | 121,590,419 | 121,629,684 | 39,266 |
| ENST00000534286.5 | hg38 | chr11 | 121,576,838 | 121,629,678 | 52,841 |
| ENST00000260197.12 | hg38 | chr11 | 121,452,314 | 121,633,763 | 181,450 |
| ENST00000525532.5 | hg38 | chr11 | 121,566,725 | 121,629,684 | 62,960 |
| ENST00000532694.5 | hg38 | chr11 | 121,576,760 | 121,629,691 | 52,932 |
| ENST00000260197.12 | hg19 | chr11 | 121,323,023 | 121,504,472 | 181,450 |
| ENST00000525532.5 | hg19 | chr11 | 121,437,434 | 121,500,393 | 62,960 |
| ENST00000532694.5 | hg19 | chr11 | 121,447,469 | 121,500,400 | 52,932 |
| ENST00000534286.5 | hg19 | chr11 | 121,447,547 | 121,500,387 | 52,841 |
| ENST00000527934.1 | hg19 | chr11 | 121,461,128 | 121,500,393 | 39,266 |
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