SSX4 SSX family member 4
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Likely benign | 0 | 2 |
| not provided | 6 | 0 |
| Uncertain significance | 0 | 6 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
8 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | CT5.4 |
| MIM | 300326 OMIM |
| HGNC | HGNC:11338 HGNC |
| Ensembl | ENSG00000268009 Ensembl |
| AllianceGenome | HGNC:11338 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000620320.4 | hg38 | chrX | 48,383,516 | 48,393,343 | 9,828 |
| ENST00000595689.3 | hg38 | chrX | 48,383,539 | 48,393,347 | 9,809 |
| ENST00000620320.4 | hg19 | chrX | 48,242,957 | 48,252,785 | 9,829 |
| ENST00000595689.3 | hg19 | chrX | 48,242,980 | 48,252,789 | 9,810 |
| Key | Value |
|---|---|
| strand | + |
| start | 48,242,967 |
| Gene Symbol | SSX4 |
| Entrez GeneId | 6,759 |
| Chr Band | Xp11.23 |
| end | 48,271,343 |
| chr | chrX |
| Name | synovial sarcoma, X breakpoint 4 |
Genome browser