STAT5B signal transducer and activator of transcription 5B
Information
- Symbol
- STAT5B
- Type
- protein-coding
- Description
- signal transducer and activator of transcription 5B
- Entrez Gene ID
- 6777
- Genome
- hg19
- Position
- chr17:40,351,194-40,440,349
- Genome
- hg38
- Position
- chr17:42,199,176-42,288,331
- MIM
- 604260 OMIM
- HGNC
- HGNC:11367 HGNC
- Ensembl
- ENSG00000173757 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Pathogenic | 1 | 44 |
| Likely pathogenic | 0 | 8 |
| Benign | 0 | 44 |
| Likely benign | 0 | 398 |
| Conflicting classifications of pathogenicity | 0 | 16 |
| not provided | 10 | 0 |
| other | 1 | 0 |
| Uncertain significance | 0 | 390 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
74 |
 |
784 |
 |
16 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | GHISID2 |
| SYNONYM | STAT5 |
| MIM | 604260 OMIM |
| HGNC | HGNC:11367 HGNC |
| Ensembl | ENSG00000173757 Ensembl |
| AllianceGenome | HGNC:11367 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000293328.8 | hg38 | chr17 | 42,199,177 | 42,276,391 | 77,215 |
| ENST00000698777.1 | hg38 | chr17 | 42,199,176 | 42,288,633 | 89,458 |
| ENST00000698778.1 | hg38 | chr17 | 42,199,181 | 42,276,397 | 77,217 |
| ENST00000698779.1 | hg38 | chr17 | 42,199,190 | 42,276,397 | 77,208 |
| ENST00000698776.1 | hg38 | chr17 | 42,199,176 | 42,288,331 | 89,156 |
| ENST00000698808.1 | hg38 | chr17 | 42,199,176 | 42,276,397 | 77,222 |
| ENST00000698809.1 | hg38 | chr17 | 42,199,176 | 42,276,397 | 77,222 |
| ENST00000293328.8 | hg19 | chr17 | 40,351,195 | 40,428,409 | 77,215 |
| ENST00000698777.1 | hg19 | chr17 | 40,351,194 | 40,440,651 | 89,458 |
| ENST00000698778.1 | hg19 | chr17 | 40,351,199 | 40,428,415 | 77,217 |
| ENST00000698779.1 | hg19 | chr17 | 40,351,208 | 40,428,415 | 77,208 |
| ENST00000698809.1 | hg19 | chr17 | 40,351,194 | 40,428,415 | 77,222 |
| ENST00000698776.1 | hg19 | chr17 | 40,351,194 | 40,440,349 | 89,156 |
| ENST00000698808.1 | hg19 | chr17 | 40,351,194 | 40,428,415 | 77,222 |
| Key | Value |
|---|---|
| strand | - |
| start | 40,351,194 |
| Gene Symbol | STAT5B |
| Entrez GeneId | 6,777 |
| Chr Band | 17q11.2 |
| end | 40,428,423 |
| chr | chr17 |
| Name | signal transducer and activator of transcription 5B |
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