TRPC3 transient receptor potential cation channel subfamily C member 3
Information
- Symbol
- TRPC3
- Type
- protein-coding
- Description
- transient receptor potential cation channel subfamily C member 3
- Entrez Gene ID
- 7222
- Genome
- hg19
- Position
- chr4:122,795,636-122,873,215
- Genome
- hg38
- Position
- chr4:121,874,481-121,952,060
- MIM
- 602345 OMIM
- HGNC
- HGNC:12335 HGNC
- Ensembl
- ENSG00000138741 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Pathogenic | 0 | 2 |
| Benign | 0 | 34 |
| Likely benign | 0 | 104 |
| Conflicting classifications of pathogenicity | 0 | 6 |
| Uncertain significance | 2 | 154 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
18 |
 |
268 |
 |
4 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | SCA41 |
| SYNONYM | TRP3 |
| MIM | 602345 OMIM |
| HGNC | HGNC:12335 HGNC |
| Ensembl | ENSG00000138741 Ensembl |
| AllianceGenome | HGNC:12335 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000264811.9 | hg38 | chr4 | 121,879,027 | 121,933,457 | 54,431 |
| ENST00000379645.8 | hg38 | chr4 | 121,874,481 | 121,952,060 | 77,580 |
| ENST00000513531.1 | hg38 | chr4 | 121,879,736 | 121,933,038 | 53,303 |
| ENST00000379645.8 | hg19 | chr4 | 122,795,636 | 122,873,215 | 77,580 |
| ENST00000264811.9 | hg19 | chr4 | 122,800,182 | 122,854,612 | 54,431 |
| ENST00000513531.1 | hg19 | chr4 | 122,800,891 | 122,854,193 | 53,303 |
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