TNFSF4 TNF superfamily member 4
Information
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Benign | 0 | 2 |
| Likely benign | 0 | 4 |
| not provided | 1 | 0 |
| Uncertain significance | 0 | 8 |
Ranking
| ClinVar | |
|---|---|
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0 |
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0 |
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0 |
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14 |
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0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | CD134L |
| SYNONYM | CD252 |
| SYNONYM | GP34 |
| SYNONYM | OX-40L |
| SYNONYM | OX4OL |
| SYNONYM | TNLG2B |
| SYNONYM | TXGP1 |
| MIM | 603594 OMIM |
| HGNC | HGNC:11934 HGNC |
| Ensembl | ENSG00000117586 Ensembl |
| AllianceGenome | HGNC:11934 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000714470.1 | hg38 | chr1 | 173,183,804 | 173,476,998 | 293,195 |
| ENST00000714471.1 | hg38 | chr1 | 173,183,814 | 173,477,148 | 293,335 |
| ENST00000367718.5 | hg38 | chr1 | 173,183,734 | 173,205,558 | 21,825 |
| ENST00000714430.1 | hg38 | chr1 | 173,183,797 | 173,477,036 | 293,240 |
| ENST00000281834.4 | hg38 | chr1 | 173,183,731 | 173,207,331 | 23,601 |
| ENST00000714429.1 | hg38 | chr1 | 173,168,727 | 173,476,991 | 308,265 |
| ENST00000714429.1 | hg19 | chr1 | 173,137,866 | 173,446,130 | 308,265 |
| ENST00000281834.4 | hg19 | chr1 | 173,152,870 | 173,176,470 | 23,601 |
| ENST00000367718.5 | hg19 | chr1 | 173,152,873 | 173,174,697 | 21,825 |
| ENST00000714430.1 | hg19 | chr1 | 173,152,936 | 173,446,175 | 293,240 |
| ENST00000714470.1 | hg19 | chr1 | 173,152,943 | 173,446,137 | 293,195 |
| ENST00000714471.1 | hg19 | chr1 | 173,152,953 | 173,446,287 | 293,335 |
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