XPA XPA, DNA damage recognition and repair factor
Information
- Symbol
- XPA
- Type
- protein-coding
- Description
- XPA, DNA damage recognition and repair factor
- Entrez Gene ID
- 7507
- Genome
- hg19
- Position
- chr9:100,437,191-100,459,622
- Genome
- hg38
- Position
- chr9:97,674,909-97,697,340
- MIM
- 611153 OMIM
- HGNC
- HGNC:12814 HGNC
- Ensembl
- ENSG00000136936 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Pathogenic | 3 | 118 |
| Likely pathogenic | 0 | 90 |
| Benign | 0 | 40 |
| Likely benign | 0 | 340 |
| Conflicting classifications of pathogenicity | 0 | 24 |
| not provided | 0 | 2 |
| Uncertain significance | 8 | 116 |
Ranking
| ClinVar | |
|---|---|
![]() |
0 |
![]() |
0 |
![]() |
120 |
![]() |
532 |
![]() |
2 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | XP1 |
| SYNONYM | XPAC |
| MIM | 611153 OMIM |
| HGNC | HGNC:12814 HGNC |
| Ensembl | ENSG00000136936 Ensembl |
| AllianceGenome | HGNC:12814 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000375128.5 | hg38 | chr9 | 97,674,909 | 97,697,340 | 22,432 |
| ENST00000375128.5 | hg19 | chr9 | 100,437,191 | 100,459,622 | 22,432 |
| Key | Value |
|---|---|
| strand | - |
| start | 100,437,190 |
| Gene Symbol | XPA |
| Entrez GeneId | 7,507 |
| Chr Band | 9q22.3 |
| end | 100,459,690 |
| chr | chr9 |
| Name | xeroderma pigmentosum, complementation group A |
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