LINC00106 long intergenic non-protein coding RNA 106
Information
- Symbol
- LINC00106
- Type
- ncRNA
- Description
- long intergenic non-protein coding RNA 106
- Entrez Gene ID
- 751580
- Genome
- hg19
- Position
- chrX:1,515,918-1,518,295
- Genome
- hg19
- Position
- chrY:1,465,918-1,468,295
- Genome
- hg38
- Position
- chrX:1,397,025-1,399,402
- Genome
- hg38
- Position
- chrY:1,397,025-1,399,402
- HGNC
- HGNC:31843 HGNC
- Ensembl
- ENSG00000236871 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| not provided | 7 | 0 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
0 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | CXYorf8 |
| SYNONYM | NCRNA00106 |
| HGNC | HGNC:31843 HGNC |
| Ensembl | ENSG00000236871 Ensembl |
| Ensembl | ENSG00000292341 Ensembl |
| AllianceGenome | HGNC:31843 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000430235.7 | hg38 | chrX | 1,397,025 | 1,399,402 | 2,378 |
| ENST00000711189.1 | hg38 | chrY | 1,396,427 | 1,398,958 | 2,532 |
| ENST00000711188.1 | hg38 | chrY | 1,397,025 | 1,399,402 | 2,378 |
| ENST00000434938.7 | hg38 | chrX | 1,396,427 | 1,398,958 | 2,532 |
| ENST00000434938.7 | hg19 | chrX | 1,515,320 | 1,517,851 | 2,532 |
| ENST00000430235.7 | hg19 | chrX | 1,515,918 | 1,518,295 | 2,378 |
| ENST00000711189.1 | hg19 | chrY | 1,465,320 | 1,467,851 | 2,532 |
| ENST00000711188.1 | hg19 | chrY | 1,465,918 | 1,468,295 | 2,378 |
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