GDPD3 glycerophosphodiester phosphodiesterase domain containing 3
Information
- Symbol
- GDPD3
- Type
- protein-coding
- Description
- glycerophosphodiester phosphodiesterase domain containing 3
- Entrez Gene ID
- 79153
- Genome
- hg19
- Position
- chr16:30,116,131-30,124,858
- Genome
- hg38
- Position
- chr16:30,104,810-30,113,537
- MIM
- 616318 OMIM
- HGNC
- HGNC:28638 HGNC
- Ensembl
- ENSG00000102886 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Benign | 0 | 2 |
| Likely benign | 0 | 8 |
| not provided | 9 | 0 |
| Uncertain significance | 0 | 36 |
Ranking
| ClinVar | |
|---|---|
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0 |
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0 |
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0 |
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46 |
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0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| HGNC | HGNC:28638 HGNC |
| SYNONYM | GDE7 |
| MIM | 616318 OMIM |
| Ensembl | ENSG00000102886 Ensembl |
| AllianceGenome | HGNC:28638 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000406256.8 | hg38 | chr16 | 30,104,810 | 30,113,537 | 8,728 |
| ENST00000406256.8 | hg19 | chr16 | 30,116,131 | 30,124,858 | 8,728 |
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