CALCA calcitonin related polypeptide alpha
Information
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Benign | 0 | 4 |
| Uncertain significance | 0 | 18 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
22 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
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MGeND data only
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| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | CALC1 |
| SYNONYM | CGRP |
| SYNONYM | CGRP-I |
| SYNONYM | CGRP-alpha |
| SYNONYM | CGRP1 |
| SYNONYM | CT |
| SYNONYM | KC |
| SYNONYM | PCT |
| MIM | 114130 OMIM |
| HGNC | HGNC:1437 HGNC |
| Ensembl | ENSG00000110680 Ensembl |
| AllianceGenome | HGNC:1437 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000486207.6 | hg38 | chr11 | 14,966,668 | 14,972,351 | 5,684 |
| ENST00000331587.9 | hg38 | chr11 | 14,968,501 | 14,972,351 | 3,851 |
| ENST00000396372.2 | hg38 | chr11 | 14,968,706 | 14,972,273 | 3,568 |
| ENST00000706042.1 | hg38 | chr11 | 14,966,622 | 14,972,354 | 5,733 |
| ENST00000706043.1 | hg38 | chr11 | 14,967,682 | 14,972,347 | 4,666 |
| ENST00000706042.1 | hg19 | chr11 | 14,988,168 | 14,993,900 | 5,733 |
| ENST00000486207.6 | hg19 | chr11 | 14,988,214 | 14,993,897 | 5,684 |
| ENST00000706043.1 | hg19 | chr11 | 14,989,228 | 14,993,893 | 4,666 |
| ENST00000331587.9 | hg19 | chr11 | 14,990,047 | 14,993,897 | 3,851 |
| ENST00000396372.2 | hg19 | chr11 | 14,990,252 | 14,993,819 | 3,568 |
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