C19orf12 chromosome 19 open reading frame 12
Information
- Symbol
- C19orf12
- Type
- protein-coding
- Description
- chromosome 19 open reading frame 12
- Entrez Gene ID
- 83636
- Genome
- hg19
- Position
- chr19:30,189,844-30,206,168
- Genome
- hg38
- Position
- chr19:29,698,937-29,715,261
- MIM
- 614297 OMIM
- HGNC
- HGNC:25443 HGNC
- Ensembl
- ENSG00000131943 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Pathogenic | 0 | 34 |
| Likely pathogenic | 0 | 32 |
| Benign | 0 | 94 |
| Likely benign | 0 | 132 |
| Conflicting classifications of pathogenicity | 0 | 22 |
| not provided | 1 | 0 |
| Uncertain significance | 0 | 302 |
Ranking
| ClinVar | |
|---|---|
![]() |
0 |
![]() |
0 |
![]() |
72 |
![]() |
484 |
![]() |
12 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | MPAN |
| SYNONYM | NBIA3 |
| SYNONYM | NBIA4 |
| SYNONYM | SPG43 |
| MIM | 614297 OMIM |
| HGNC | HGNC:25443 HGNC |
| Ensembl | ENSG00000131943 Ensembl |
| AllianceGenome | HGNC:25443 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000392276.1 | hg38 | chr19 | 29,701,163 | 29,715,221 | 14,059 |
| ENST00000392275.1 | hg38 | chr19 | 29,702,341 | 29,715,457 | 13,117 |
| ENST00000623113.3 | hg38 | chr19 | 29,699,576 | 29,715,060 | 15,485 |
| ENST00000592153.5 | hg38 | chr19 | 29,701,689 | 29,715,224 | 13,536 |
| ENST00000323670.14 | hg38 | chr19 | 29,698,937 | 29,715,261 | 16,325 |
| ENST00000323670.14 | hg19 | chr19 | 30,189,844 | 30,206,168 | 16,325 |
| ENST00000623113.3 | hg19 | chr19 | 30,190,483 | 30,205,967 | 15,485 |
| ENST00000392276.1 | hg19 | chr19 | 30,192,070 | 30,206,128 | 14,059 |
| ENST00000592153.5 | hg19 | chr19 | 30,192,596 | 30,206,131 | 13,536 |
| ENST00000392275.1 | hg19 | chr19 | 30,193,248 | 30,206,364 | 13,117 |
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