KDM2B lysine demethylase 2B

Information
Symbol
KDM2B
Type
protein-coding
Description
lysine demethylase 2B
Entrez Gene ID
84678
Genome
hg19
Position
chr12:121,866,899-122,018,928
Genome
hg38
Position
chr12:121,429,096-121,581,023
MIM
609078 OMIM
HGNC
HGNC:13610 HGNC
Ensembl
ENSG00000089094 Ensembl
Links
NCBI Gene Cards OncoKB
Clinical Significance
MGeND ClinVar
Pathogenic 0 4
Likely pathogenic 0 2
Benign 0 30
Likely benign 0 58
Uncertain significance 0 162
Ranking
ClinVar
0
0
12
240
2
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
Target data :
MGeND data only
Category :
Search word :
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
TypeID
SYNONYM CXXC2
SYNONYM FBXL10
SYNONYM Fbl10
SYNONYM JHDM1B
SYNONYM PCCX2
MIM 609078 OMIM
HGNC HGNC:13610 HGNC
Ensembl ENSG00000089094 Ensembl
AllianceGenome HGNC:13610
DescrptionSourceLinks
IDGenomeChromosomeStartEndLength
ENST00000377071.9 hg38 chr12 121,429,096 121,581,023 151,928
ENST00000543852.5 hg38 chr12 121,516,347 121,537,616 21,270
ENST00000377069.8 hg38 chr12 121,429,097 121,580,459 151,363
ENST00000538046.6 hg38 chr12 121,493,846 121,581,015 87,170
ENST00000542973.5 hg38 chr12 121,429,509 121,509,706 80,198
ENST00000611216.4 hg38 chr12 121,429,099 121,581,015 151,917
ENST00000377069.8 hg19 chr12 121,866,900 122,018,364 151,465
ENST00000377071.9 hg19 chr12 121,866,899 122,018,928 152,030
ENST00000538046.6 hg19 chr12 121,931,649 122,018,920 87,272
ENST00000542973.5 hg19 chr12 121,867,312 121,947,509 80,198
ENST00000611216.4 hg19 chr12 121,866,902 122,018,920 152,019
ENST00000543852.5 hg19 chr12 121,954,150 121,975,521 21,372
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