RUNX2 RUNX family transcription factor 2
Information
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Pathogenic | 33 | 199 |
| Likely pathogenic | 0 | 58 |
| Benign | 2 | 118 |
| Likely benign | 2 | 192 |
| Conflicting classifications of pathogenicity | 0 | 26 |
| not provided | 0 | 2 |
| Uncertain significance | 0 | 378 |
Ranking
| ClinVar | |
|---|---|
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0 |
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0 |
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78 |
![]() |
800 |
![]() |
43 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | AML3 |
| SYNONYM | CBF-alpha-1 |
| SYNONYM | CBFA1 |
| SYNONYM | CCD |
| SYNONYM | CCD1 |
| SYNONYM | CLCD |
| SYNONYM | OSF-2 |
| SYNONYM | OSF2 |
| SYNONYM | PEA2aA |
| SYNONYM | PEBP2aA |
| MIM | 600211 OMIM |
| HGNC | HGNC:10472 HGNC |
| Ensembl | ENSG00000124813 Ensembl |
| AllianceGenome | HGNC:10472 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000371432.7 | hg38 | chr6 | 45,328,317 | 45,551,082 | 222,766 |
| ENST00000576263.5 | hg38 | chr6 | 45,328,727 | 45,664,349 | 335,623 |
| ENST00000647337.2 | hg38 | chr6 | 45,328,330 | 45,551,082 | 222,753 |
| ENST00000359524.7 | hg38 | chr6 | 45,422,485 | 45,551,079 | 128,595 |
| ENST00000371438.5 | hg38 | chr6 | 45,328,369 | 45,551,079 | 222,711 |
| ENST00000371436.10 | hg38 | chr6 | 45,328,727 | 45,547,393 | 218,667 |
| ENST00000625924.1 | hg38 | chr6 | 45,422,577 | 45,547,305 | 124,729 |
| ENST00000371432.7 | hg19 | chr6 | 45,296,054 | 45,518,819 | 222,766 |
| ENST00000647337.2 | hg19 | chr6 | 45,296,067 | 45,518,819 | 222,753 |
| ENST00000371438.5 | hg19 | chr6 | 45,296,106 | 45,518,816 | 222,711 |
| ENST00000371436.10 | hg19 | chr6 | 45,296,464 | 45,515,130 | 218,667 |
| ENST00000576263.5 | hg19 | chr6 | 45,296,464 | 45,632,086 | 335,623 |
| ENST00000359524.7 | hg19 | chr6 | 45,390,222 | 45,518,816 | 128,595 |
| ENST00000625924.1 | hg19 | chr6 | 45,390,314 | 45,515,042 | 124,729 |
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