SOCS1 suppressor of cytokine signaling 1

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Information

Symbol: SOCS1
Type: protein-coding
Description: suppressor of cytokine signaling 1
Entrez Gene ID: 8651
Genome: hg19
Position: chr16:11,348,274-11,350,057
Genome: hg38
Position: chr16:11,254,417-11,256,200
MIM: 603597 OMIM
HGNC: HGNC:19383 HGNC
Ensembl: ENSG00000185338 Ensembl
Links: NCBI Gene Cards OncoKB

Clinical Significance

	MGeND	ClinVar
Pathogenic	0	12
Likely pathogenic	0	12
Benign	0	8
Likely benign	0	8
not provided	5	4
Uncertain significance	0	68

Ranking

	ClinVar
	0
	0
	2
	90
	10

Frequency

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

Disease area statistics

Locus Zoom

Variants

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Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	MGeND				Genome	ClinVar			CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction
Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	Entry	Origin	Type	Annotation	Genome	Entry	Origin	Annotation	CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction

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Name	MGeND				Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

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Target data	:	MGeND data only
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Name	MGeND				Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Type	ID
SYNONYM	AISIMD
SYNONYM	CIS1
SYNONYM	CISH1
SYNONYM	JAB
SYNONYM	SOCS-1
SYNONYM	SSI-1
SYNONYM	SSI1
SYNONYM	TIP-3
SYNONYM	TIP3
MIM	603597 OMIM
HGNC	HGNC:19383 HGNC
Ensembl	ENSG00000185338 Ensembl
AllianceGenome	HGNC:19383

Descrption	Source	Links

ID	Genome	Chromosome	Start	End	Length
ENST00000332029.4	hg38	chr16	11,254,417	11,256,204	1,788
ENST00000644787.1	hg38	chr16	11,254,417	11,256,200	1,784
ENST00000644787.1	hg19	chr16	11,348,274	11,350,057	1,784
ENST00000332029.4	hg19	chr16	11,348,274	11,350,061	1,788

Key	Value
strand	-
start	11,348,273
Vogelstein	TSG
Gene Symbol	SOCS1
Entrez GeneId	8,651
Chr Band	16p13.13
end	11,350,038
chr	chr16
Name	suppressor of cytokine signaling 1

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