TRMT10A tRNA methyltransferase 10A

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Information
Clinical Significance
Ranking
Frequency
Disease area statistics
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Variants
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Information

Symbol: TRMT10A
Type: protein-coding
Description: tRNA methyltransferase 10A
Entrez Gene ID: 93587
Genome: hg19
Position: chr4:100,467,884-100,484,825
Genome: hg38
Position: chr4:99,546,727-99,563,668
MIM: 616013 OMIM
HGNC: HGNC:28403 HGNC
Ensembl: ENSG00000145331 Ensembl
Links: NCBI Gene Cards OncoKB

Clinical Significance

	MGeND	ClinVar
Pathogenic	0	18
Likely pathogenic	0	16
Benign	0	8
Likely benign	0	68
Conflicting classifications of pathogenicity	0	6
Uncertain significance	0	132

Ranking

	ClinVar
	0
	0
	36
	198
	0

Frequency

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

Disease area statistics

[No Data.]

Locus Zoom

Variants

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Target data	:	MGeND data only
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Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	MGeND				Genome	ClinVar			CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction
Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	Entry	Origin	Type	Annotation	Genome	Entry	Origin	Annotation	CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction

Search Word

Target data	:	MGeND data only
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Name	MGeND				Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Search Word

Target data	:	MGeND data only
Category	:
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Filtering	:

Name	MGeND				Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Type	ID
SYNONYM	HEL-S-88
SYNONYM	MSSGM
SYNONYM	MSSGM1
SYNONYM	RG9MTD2
SYNONYM	TRM10
MIM	616013 OMIM
HGNC	HGNC:28403 HGNC
Ensembl	ENSG00000145331 Ensembl
AllianceGenome	HGNC:28403

Descrption	Source	Links

ID	Genome	Chromosome	Start	End	Length
ENST00000273962.7	hg38	chr4	99,546,727	99,563,668	16,942
ENST00000394877.7	hg38	chr4	99,546,709	99,564,017	17,309
ENST00000394876.7	hg38	chr4	99,546,711	99,564,039	17,329
ENST00000394877.7	hg19	chr4	100,467,866	100,485,174	17,309
ENST00000394876.7	hg19	chr4	100,467,868	100,485,196	17,329
ENST00000273962.7	hg19	chr4	100,467,884	100,484,825	16,942

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