TSIX TSIX transcript, XIST antisense RNA
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| not provided | 6 | 0 |
Ranking
| ClinVar | |
|---|---|
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Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | LINC00013 |
| SYNONYM | NCRNA00013 |
| SYNONYM | XIST-AS |
| SYNONYM | XIST-AS1 |
| SYNONYM | XISTAS |
| MIM | 300181 OMIM |
| HGNC | HGNC:12377 HGNC |
| Ensembl | ENSG00000270641 Ensembl |
| AllianceGenome | HGNC:12377 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000706914.1 | hg38 | chrX | 73,809,317 | 73,820,983 | 11,667 |
| ENST00000604411.1 | hg38 | chrX | 73,792,205 | 73,829,231 | 37,027 |
| ENST00000604411.1 | hg19 | chrX | 73,012,040 | 73,049,066 | 37,027 |
| ENST00000706914.1 | hg19 | chrX | 73,029,152 | 73,040,818 | 11,667 |
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