ENST00000274030.11 USP53

Information
Transcript ID
ENST00000274030.11
Genome
hg38
Position
chr4:119,212,713-119,294,708
Strand
+
CDS length
2,403
Amino acid length
801
Gene symbol
USP53
Gene type
protein-coding
Gene description
ubiquitin specific peptidase 53
Gene Entrez Gene ID
54532
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 119,212,713 119,212,873
2 119,217,550 119,217,673
3 119,239,218 119,239,903
4 119,245,337 119,245,429
5 119,248,748 119,248,882
6 119,256,246 119,256,359
7 119,256,441 119,256,523
8 119,259,820 119,259,925
9 119,260,507 119,260,653
10 119,261,715 119,261,864
11 119,267,320 119,267,482
12 119,268,268 119,268,420
13 119,269,691 119,269,837
14 119,271,296 119,272,034
15 119,273,632 119,273,708
16 119,292,338 119,294,708
CDS
Exon number Type Start Stop
3 CDS 119,239,760 119,239,903
4 CDS 119,245,337 119,245,429
5 CDS 119,248,748 119,248,882
6 CDS 119,256,246 119,256,359
7 CDS 119,256,441 119,256,523
8 CDS 119,259,820 119,259,925
9 CDS 119,260,507 119,260,653
10 CDS 119,261,715 119,261,864
11 CDS 119,267,320 119,267,482
12 CDS 119,268,268 119,268,420
13 CDS 119,269,691 119,269,837
14 CDS 119,271,296 119,272,034
15 CDS 119,273,632 119,273,708
16 CDS 119,292,338 119,292,489
Other genome
Genome Chromosome Start End Links
hg19 chr4 120,133,868 120,215,863 Link
CDS sequence
ATGGCATGGGTAAAATTCTTACGGAAACCTGGTGGCAATCTTGGAAAAGTTTATCAGCCTGGAAGTATGCTATCACTAGCCCCTACCAAAGGCTTGTTAAATGAACCAGGACAAAACAGCTGCTTTCTTAATAGCGCTGTACAGGTTTTATGGCAATTGGATATATTCCGACGAAGCTTGCGGGTTTTGACTGGACATGTTTGTCAGGGAGATGCCTGTATATTTTGTGCATTGAAGACGATATTTGCACAGTTCCAACACAGTCGAGAAAAAGCACTTCCCTCAGATAACATAAGGCATGCTCTTGCAGAAAGTTTCAAAGATGAGCAGCGATTTCAACTTGGCCTTATGGATGATGCTGCGGAGTGCTTTGAAAATATGTTGGAGAGGATTCATTTTCACATAGTGCCAAGCAGAGATGCAGACATGTGTACCTCTAAATCTTGTATCACTCACCAGAAGTTTGCTATGACTCTGTATGAACAGTGTGTGTGTCGTAGCTGTGGAGCATCGTCAGATCCTCTACCTTTTACAGAATTTGTGCGGTACATTTCTACAACAGCCTTATGCAATGAGGTTGAAAGAATGTTGGAAAGGCATGAACGCTTTAAACCTGAAATGTTTGCAGAATTGCTACAAGCAGCAAATACAACAGATGACTATAGGAAATGTCCTAGTAACTGTGGCCAAAAAATAAAAATTCGCCGTGTTTTAATGAATTGCCCAGAGATTGTTACAATTGGTTTAGTCTGGGACTCCGAGCATTCTGACTTGACCGAAGCTGTTGTTCGGAATCTAGCAACACATCTTTATCTTCCTGGGCTTTTTTATAGAGTTACTGATGAAAATGCCAAAAATAGTGAACTTAACCTTGTTGGTATGATCTGCTACACCAGCCAACATTATTGTGCCTTTGCATTTCACACCAAAAGTTCCAAATGGGTATTTTTTGATGATGCAAATGTGAAAGAGATTGGAACTAGATGGAAAGATGTTGTCTCCAAATGCATTCGATGCCACTTTCAGCCACTACTTTTGTTTTATGCAAACCCAGATGGCACAGCAGTTTCTACTGAGGATGCACTCAGGCAGGTCATCAGCTGGTCACATTACAAATCTGTTGCAGAAAATATGGGATGTGAAAAGCCTGTAATTCATAAGTCAGATAATTTAAAAGAAAATGGATTTGGTGATCAGGCAAAGCAGAGAGAAAATCAGAAATTTCCAACTGATAATATTTCATCATCTAATCGGAGCCACAGTCACACAGGTGTAGGGAAAGGACCAGCTAAGTTAAGTCACATTGATCAAAGGGAAAAGATAAAAGACATTTCCAGAGAATGTGCTCTGAAAGCTATTGAACAGAAAAACTTACTTTCTTCACAAAGGAAAGATTTAGAGAAGGGACAAAGAAAAGATTTAGGACGACATAGAGATTTGGTTGATGAAGACCTTTCACATTTCCAATCTGGATCACCTCCTGCCCCAAATGGTTTTAAACAACATGGGAATCCACATCTATATCATAGTCAAGGAAAAGGATCATATAAACATGACCGAGTTGTACCTCAGAGTCGAGCTTCTGCACAAATAATAAGTTCAAGTAAATCCCAGATTCTTGCTCCAGGAGAGAAAATAACTGGCAAAGTTAAGAGTGACAATGGCACTGGATATGACACAGACAGCAGCCAAGATTCTAGGGATAGAGGAAACAGCTGTGATAGCAGCAGTAAAAGCCGGAACCGAGGTTGGAAACCTATGAGAGAAACATTAAATGTTGATAGTATTTTTAGTGAAAGTGAAAAAAGACAGCATAGTCCAAGACATAAACCAAATATCAGTAATAAGCCTAAATCTAGCAAGGATCCGAGTTTTAGTAATTGGCCAAAAGAGAATCCAAAGCAAAAAGGTTTAATGACCATATATGAAGATGAAATGAAGCAGGAAATAGGAAGCAGAAGTTCCCTTGAATCTAATGGAAAAGGAGCAGAGAAAAATAAAGGCCTTGTAGAGGGTAAAGTGCATGGTGATAATTGGCAGATGCAAAGGACTGAGTCTGGATATGAAAGCAGTGATCACATCAGTAATGGTTCTACTAATTTGGACTCACCTGTTATCGATGGAAATGGTACAGTAATGGATATCAGTGGTGTTAAAGAAACAGTATGCTTCAGTGACCAGATTACGACAAGCAACCTAAATAAAGAACGTGGGGACTGTACCTCCCTTCAGAGCCAACATCACTTAGAAGATCACATGTACATGAAGACAATGGAAAGTTATTTCCTTCATCCAGTCTACAAATACCCAAGGACCATAATGCAAGAGAACATATCCACCAGTCAGATGAACAGAAACTTGAAAAACCGAATGAATGCAAATTTTCTGAGTGGCTTAATATAG
Amino sequence
MAWVKFLRKPGGNLGKVYQPGSMLSLAPTKGLLNEPGQNSCFLNSAVQVLWQLDIFRRSLRVLTGHVCQGDACIFCALKTIFAQFQHSREKALPSDNIRHALAESFKDEQRFQLGLMDDAAECFENMLERIHFHIVPSRDADMCTSKSCITHQKFAMTLYEQCVCRSCGASSDPLPFTEFVRYISTTALCNEVERMLERHERFKPEMFAELLQAANTTDDYRKCPSNCGQKIKIRRVLMNCPEIVTIGLVWDSEHSDLTEAVVRNLATHLYLPGLFYRVTDENAKNSELNLVGMICYTSQHYCAFAFHTKSSKWVFFDDANVKEIGTRWKDVVSKCIRCHFQPLLLFYANPDGTAVSTEDALRQVISWSHYKSVAENMGCEKPVIHKSDNLKENGFGDQAKQRENQKFPTDNISSSNRSHSHTGVGKGPAKLSHIDQREKIKDISRECALKAIEQKNLLSSQRKDLEKGQRKDLGRHRDLVDEDLSHFQSGSPPAPNGFKQHGNPHLYHSQGKGSYKHDRVVPQSRASAQIISSSKSQILAPGEKITGKVKSDNGTGYDTDSSQDSRDRGNSCDSSSKSRNRGWKPMRETLNVDSIFSESEKRQHSPRHKPNISNKPKSSKDPSFSNWPKENPKQKGLMTIYEDEMKQEIGSRSSLESNGKGAEKNKGLVEGKVHGDNWQMQRTESGYESSDHISNGSTNLDSPVIDGNGTVMDISGVKETVCFSDQITTSNLNKERGDCTSLQSQHHLEDHMYMKTMESYFLHPVYKYPRTIMQENISTSQMNRNLKNRMNANFLSGLI*