ENST00000535657.5 LTO1
Information
- Transcript ID
- ENST00000535657.5
- Genome
- hg38
- Position
- chr11:69,666,667-69,675,321
- Strand
- -
- CDS length
- 414
- Amino acid length
- 138
- Gene symbol
- LTO1
- Gene type
- protein-coding
- Gene description
- LTO1 maturation factor of ABCE1
- Gene Entrez Gene ID
- 220064
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 6 | 69,666,667 | 69,666,839 |
| 5 | 69,667,479 | 69,667,587 |
| 4 | 69,667,895 | 69,668,012 |
| 3 | 69,671,749 | 69,671,819 |
| 2 | 69,673,216 | 69,673,321 |
| 1 | 69,675,190 | 69,675,321 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 5 | CDS | 69,667,519 | 69,667,587 |
| 4 | CDS | 69,667,895 | 69,668,012 |
| 3 | CDS | 69,671,749 | 69,671,819 |
| 2 | CDS | 69,673,216 | 69,673,321 |
| 1 | CDS | 69,675,190 | 69,675,239 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr11 | 69,481,435 | 69,490,089 | Link |
CDS sequence
ATGGCTGGCAGTCAGGACATATTCGATGCCATCGTGATGGCGGATGAGAGGTTTCATGGGGAAGGGTATCGGGAAGGCTATGAAGAAGGCAGTAGTTTGGGTGTGATGGAGGGAAGGCAGCATGGCACGCTGCATGGAGCCAAAATCGGGTCTGAGATCGGGTGCTACCAAGGTTTTGCTTTTGCATGGAAATGTCTACTGCACAGTTGCACCACTGAGAAGGACAGCAGAAAGATGAAGGTCTTAGAATCATTGATTGGAATGATCCAGAAATTCCCTTATGATGACCCTACTTACGATAAACTCCATGAAGACTTAGACAAGATCAGAGGAAAATTTAAACAGTTTTGTTCGTTACTCAATGTTCAGCCAGACTTTAAAATTAGTGCAGAAGGTTCCGGACTTTCATTTTGA
Amino sequence
MAGSQDIFDAIVMADERFHGEGYREGYEEGSSLGVMEGRQHGTLHGAKIGSEIGCYQGFAFAWKCLLHSCTTEKDSRKMKVLESLIGMIQKFPYDDPTYDKLHEDLDKIRGKFKQFCSLLNVQPDFKISAEGSGLSF*