ENST00000543106.6 RPH3A

Information
Transcript ID
ENST00000543106.6
Genome
hg38
Position
chr12:112,575,097-112,896,914
Strand
+
CDS length
2,085
Amino acid length
695
Gene symbol
RPH3A
Gene type
protein-coding
Gene description
rabphilin 3A
Gene Entrez Gene ID
22895
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 112,575,097 112,575,319
2 112,792,143 112,792,263
3 112,828,301 112,828,389
4 112,836,491 112,836,502
5 112,847,696 112,847,842
6 112,865,414 112,865,543
7 112,866,757 112,866,840
8 112,868,430 112,868,595
9 112,869,759 112,869,797
10 112,869,893 112,870,039
11 112,875,084 112,875,170
12 112,875,679 112,875,741
13 112,876,642 112,876,866
14 112,879,119 112,879,198
15 112,881,772 112,881,846
16 112,883,293 112,883,402
17 112,887,797 112,887,923
18 112,890,024 112,890,080
19 112,890,849 112,891,003
20 112,894,578 112,894,659
21 112,895,777 112,895,873
22 112,896,650 112,896,914
CDS
Exon number Type Start Stop
3 CDS 112,828,319 112,828,389
4 CDS 112,836,491 112,836,502
5 CDS 112,847,696 112,847,842
6 CDS 112,865,414 112,865,543
7 CDS 112,866,757 112,866,840
8 CDS 112,868,430 112,868,595
9 CDS 112,869,759 112,869,797
10 CDS 112,869,893 112,870,039
11 CDS 112,875,084 112,875,170
12 CDS 112,875,679 112,875,741
13 CDS 112,876,642 112,876,866
14 CDS 112,879,119 112,879,198
15 CDS 112,881,772 112,881,846
16 CDS 112,883,293 112,883,402
17 CDS 112,887,797 112,887,923
18 CDS 112,890,024 112,890,080
19 CDS 112,890,849 112,891,003
20 CDS 112,894,578 112,894,659
21 CDS 112,895,777 112,895,873
22 CDS 112,896,650 112,896,780
Other genome
Genome Chromosome Start End Links
hg19 chr12 113,012,901 113,334,719 Link
CDS sequence
ATGACTGACACCGTGTTCAGCAACAGTTCTAACCGTTGGATGTACCCCAGTGACCGGCCCCTTCAATCAAATGATAAAGAACAGCTCCAGGCAGGCTGGTCCGTCCACCCCGGTGGTCAGCCTGACAGGCAGAGGAAGCAGGAAGAGCTGACTGATGAGGAGAAAGAAATCATCAACAGGGTGATTGCTCGAGCTGAGAAAATGGAAGAGATGGAGCAGGAGCGAATCGGACGCCTGGTGGACCGCCTAGAAAACATGAGGAAGAACGTGGCTGGAGATGGGGTGAACCGCTGCATACTGTGTGGAGAACAGCTGGGGATGCTGGGCTCTGCCTGTGTAGTATGTGAGGACTGTAAGAAGAACGTCTGCACCAAGTGCGGAGTGGAGACCAACAACCGCCTGCATTCTGTGTGGCTCTGCAAAATCTGCATTGAGCAGAGGGAGGTGTGGAAGCGTTCTGGAGCGTGGTTCTTCAAAGGCTTCCCCAAACAGGTCCTCCCACAGCCTATGCCTATAAAGAAGACCAAGCCCCAGCAGCCTGTCAGTGAGCCTGCTGCCCCTGAACAGCCTGCTCCTGAGCCCAAGCACCCTGCCCGGGCTCCAGCTCGAGGTGACAGTGAAGATAGGAGGGGCCCGGGTCAGAAGACAGGCCCTGACCCAGCCTCTGCTCCCGGGCGAGGAAACTATGGGCCTCCCGTGCGCAGGGCCTCCGAGGCACGAATGAGCTCATCTAGCCGAGATTCAGAGAGCTGGGACCACAGTGGGGGTGCTGGAGACTCCAGCCGGAGCCCAGCAGGTTTGAGACGGGCCAACTCAGTCCAGGCCTCCAGACCTGCCCCAGGCTCGGTGCAGAGCCCAGCGCCACCTCAGCCTGGGCAGCCAGGGACCCCAGGAGGAAGCAGACCGGGTCCTGGGCCAGCAGGACGCTTTCCAGATCAGAAGCCAGAGGTGGCTCCGAGCGACCCTGGGACCACTGCCCCACCCCGAGAGGAGAGAACAGGGGGAGTCGGGGGCTACCCAGCAGTTGGAGCCAGAGAGGACCGAATGAGCCACCCCTCCGGACCCTATTCCCAAGCATCTGCAGCTGCCCCCCAGCCTGCTGCAGCCCGCCAGCCACCACCCCCAGAGGAGGAGGAAGAGGAAGCCAACAGCTACGATTCGGATGAAGCAACCACCCTGGGTGCCCTGGAATTCAGCCTTCTCTACGACCAGGACAACAGCTCCCTGCAGTGCACCATCATTAAGGCCAAGGGCCTGAAGCCCATGGATTCAAACGGCTTGGCTGATCCCTACGTTAAGCTGCACCTCCTGCCGGGAGCCAGCAAGTCCAACAAGCTTCGTACAAAAACTCTGCGGAATACCCGGAACCCCATCTGGAATGAGACCCTCGTGTATCACGGCATCACCGATGAGGACATGCAAAGGAAGACCCTCAGGATCTCCGTCTGTGATGAGGACAAATTTGGCCACAATGAATTTATTGGTGAGACCAGATTCTCCCTCAAGAAACTGAAGCCCAACCAGAGGAAGAATTTCAACATCTGCCTGGAGCGAGTGATTCCTATGAAACGTGCTGGGACCACCGGGTCAGCCCGAGGCATGGCCCTTTATGAGGAAGAGCAGGTGGAGCGTGTTGGTGACATCGAGGAGCGTGGCAAGATCCTGGTCTCCCTCATGTACAGCACACAGCAGGGAGGCCTCATTGTGGGCATCATACGCTGCGTGCACCTGGCTGCCATGGACGCTAATGGCTACTCAGACCCATTCGTCAAGCTCTGGCTGAAACCGGACATGGGAAAGAAGGCCAAACACAAGACTCAAATTAAAAAGAAAACCTTGAATCCCGAATTCAATGAGGAGTTTTTCTATGACATCAAACACAGTGACCTGGCAAAGAAGTCACTGGACATTTCAGTCTGGGACTATGACATCGGCAAGTCCAATGATTACATCGGAGGCTGCCAGCTGGGGATCTCTGCCAAGGGAGAGCGCTTAAAACACTGGTACGAGTGTCTGAAAAATAAAGACAAGAAGATAGAGCGCTGGCACCAGCTACAGAATGAGAACCACGTGTCAAGTGATTAG
Amino sequence
MTDTVFSNSSNRWMYPSDRPLQSNDKEQLQAGWSVHPGGQPDRQRKQEELTDEEKEIINRVIARAEKMEEMEQERIGRLVDRLENMRKNVAGDGVNRCILCGEQLGMLGSACVVCEDCKKNVCTKCGVETNNRLHSVWLCKICIEQREVWKRSGAWFFKGFPKQVLPQPMPIKKTKPQQPVSEPAAPEQPAPEPKHPARAPARGDSEDRRGPGQKTGPDPASAPGRGNYGPPVRRASEARMSSSSRDSESWDHSGGAGDSSRSPAGLRRANSVQASRPAPGSVQSPAPPQPGQPGTPGGSRPGPGPAGRFPDQKPEVAPSDPGTTAPPREERTGGVGGYPAVGAREDRMSHPSGPYSQASAAAPQPAAARQPPPPEEEEEEANSYDSDEATTLGALEFSLLYDQDNSSLQCTIIKAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPIWNETLVYHGITDEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKPNQRKNFNICLERVIPMKRAGTTGSARGMALYEEEQVERVGDIEERGKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKKIERWHQLQNENHVSSD*