ENST00000512175.3 SPMAP2L
Information
- Transcript ID
- ENST00000512175.3
- Genome
- hg38
- Position
- chr4:56,530,606-56,603,507
- Strand
- +
- CDS length
- 1,398
- Amino acid length
- 466
- Gene symbol
- SPMAP2L
- Gene type
- protein-coding
- Gene description
- sperm microtubule associated protein 2 like
- Gene Entrez Gene ID
- 100506564
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
1 | 56,530,606 | 56,531,169 |
2 | 56,548,790 | 56,548,823 |
3 | 56,552,549 | 56,552,614 |
4 | 56,559,392 | 56,559,520 |
5 | 56,575,505 | 56,575,642 |
6 | 56,584,497 | 56,584,611 |
7 | 56,596,500 | 56,596,631 |
8 | 56,600,934 | 56,601,109 |
9 | 56,603,209 | 56,603,507 |
CDS
Exon number | Type | Start | Stop |
---|---|---|---|
1 | CDS | 56,530,677 | 56,531,169 |
2 | CDS | 56,548,790 | 56,548,823 |
3 | CDS | 56,552,549 | 56,552,614 |
4 | CDS | 56,559,392 | 56,559,520 |
5 | CDS | 56,575,505 | 56,575,642 |
6 | CDS | 56,584,497 | 56,584,611 |
7 | CDS | 56,596,500 | 56,596,631 |
8 | CDS | 56,600,934 | 56,601,109 |
9 | CDS | 56,603,209 | 56,603,323 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg19 | chr4 | 57,396,772 | 57,469,673 | Link |
CDS sequence
ATGGAGAACCAAGAGTTTCTAAGTTCATCTGCGCCGTCCGAGGTGACCGATGGGCAGGTCTCAACAGAAATATCCACTTGCTCCGAAGTCTTCCAGAAGCCCATTGTGCTCAGGATTCTCGACACTCACAGAGAGCTTGAGGAGTCCGAGGATCCCGAGAAACACGAGAATCCCGAGGAACCCGAGGAGGTCAGGGAGCAAGACCAGAGAGACGAGTCCGAGGAATGTGATGAGCCTCATGAGTCCTATGAGCCCCACGCTCCCTATGCGCCCCACAAGCCCCGGGACTCCTATGCACCTTACGAACTCCATGGGCCCCATGCAGCCCCCAAACTCCTCAAGGCCCGTGAACCCCGCCAGCTCCGCCACACCCGTGAGCCCCGCAAGTCCCGCGAGGCCAAGGAAACCGAGTTGCTTCCCAGCGCCGCAGTAATGATCTCCCCCTCTCTGATCACCAGAGCCCCGCCACGGCCTCAGCTGTCTTTCCTGGGTGCAAATCCTGTTTCCTGTGACTTTGTAAGGAAATGTTTTTCTTCTAGGAAGAGAACCCCAAATCTTTCAAAGCCTAAAAAGCAATGGGGAACTCCAGACAGAAAACTGTTTTGGGGAAATCAAGATCCTATTCGCCCTGTTTCCCAGGGTGCTTTGAAGGCTCAGCTGACCAAAAGACTTGAGAACCTTGCCCAGCCCAAGGAAGTTTCCTGCCACTATGTACCTAACAGGGCTCAATACTACCACAGCTGTGGAAGAGAGTCTGTAATTTGGGAGATCACTCCTCCTGCATTGTTTAGACAACCCTCCAAAAGGATCCAGAGGCTGTCACAGCCCAATGGATTCAAAAGACAGTGTCTACTAAATAGACCCTTCAGTGATAACTCAGCAAGAGATTCTCTTCGAATCTCTGATCCTTCTCCCCGGATATTACAACTCTCAGTAGCCAAAGGCACAGACCCAAACTATCATCCTTCAAAAAAAATGCAAACCAAGATTTCACTTTCTACCCTGAGTGCGATTGCAACTCCAAGAATTATAGAGCTTGCCCACCCAAGGATCAAGTTAGAGGGTCTGTGCTATGAAAGACAAAGAAGTGAACTGCCCATCCGTCCTGTACCTCCTGCTGCCATGATAGCTAAACCTAGCCCCCGAACAATAGCTCTAGCGAAGTCCAAGTCTGTTCATCAAGATTATCTACCTGACCGTGATGCCCATTGGCCAGTATCTTATGCTACTACTCATTCCAAAGCATCACCTAGGATTCAGGAACTAGCTAATCCAAATAAGAGGGCTCCTGTGCGTATTGTGTATTATGATCCAGATGTCTTTAAAACCAAGCCAGCTGCTTTGAAAGCACAGTGTTCTCAAAGGATCTGGGAGTTGTCACAACCTCTTACACGTTAA
Amino sequence
MENQEFLSSSAPSEVTDGQVSTEISTCSEVFQKPIVLRILDTHRELEESEDPEKHENPEEPEEVREQDQRDESEECDEPHESYEPHAPYAPHKPRDSYAPYELHGPHAAPKLLKAREPRQLRHTREPRKSREAKETELLPSAAVMISPSLITRAPPRPQLSFLGANPVSCDFVRKCFSSRKRTPNLSKPKKQWGTPDRKLFWGNQDPIRPVSQGALKAQLTKRLENLAQPKEVSCHYVPNRAQYYHSCGRESVIWEITPPALFRQPSKRIQRLSQPNGFKRQCLLNRPFSDNSARDSLRISDPSPRILQLSVAKGTDPNYHPSKKMQTKISLSTLSAIATPRIIELAHPRIKLEGLCYERQRSELPIRPVPPAAMIAKPSPRTIALAKSKSVHQDYLPDRDAHWPVSYATTHSKASPRIQELANPNKRAPVRIVYYDPDVFKTKPAALKAQCSQRIWELSQPLTR*