ENST00000649278.1 CMTM5
Information
- Transcript ID
- ENST00000649278.1
- Genome
- hg38
- Position
- chr14:23,376,773-23,379,669
- Strand
- +
- CDS length
- 471
- Amino acid length
- 157
- Gene symbol
- CMTM5
- Gene type
- protein-coding
- Gene description
- CKLF like MARVEL transmembrane domain containing 5
- Gene Entrez Gene ID
- 116173
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 23,376,773 | 23,376,807 |
| 2 | 23,377,222 | 23,377,377 |
| 3 | 23,378,349 | 23,378,501 |
| 4 | 23,379,031 | 23,379,123 |
| 5 | 23,379,299 | 23,379,383 |
| 6 | 23,379,474 | 23,379,669 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 2 | CDS | 23,377,252 | 23,377,377 |
| 3 | CDS | 23,378,349 | 23,378,501 |
| 4 | CDS | 23,379,031 | 23,379,123 |
| 5 | CDS | 23,379,299 | 23,379,383 |
| 6 | CDS | 23,379,474 | 23,379,487 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr14 | 23,845,982 | 23,848,878 | Link |
CDS sequence
ATGCTCAGTGCTCGAGATCGCCGGGACCGGCACCCTGAGGAGGGGGTAGTTGCAGAGCTCCAGGGCTTCGCGGTGGACAAGGCCTTCCTCACCTCCCACAAGGGCATCCTGCTGGAAACCGAGCTGGCCCTGACCCTCATCATCTTCATCTGCTTCACGGCCTCCATCTCTGCCTACATGGCCGCGGCGCTACTGGAGTTCTTCATCACACTTGCCTTCCTCTTCCTCTATGCCACCCAGTACTACCAGCGCTTCGACCGAATTAACTGGCCCTGTCTGGACTTCCTGCGCTGTGTCAGTGCCATCATCATCTTCCTGGTGGTCTCCTTTGCAGCTGTGACCTCCCGGGACGGAGCTGCCATTGCTGCTTTTGTTTTTGGCATCATCCTGGTTTCCATCTTTGCCTATGATGCCTTCAAGATCTACCGGACTGAGATGGCACCCGGGGCCAGCCAGGGGGACCAGCAGTGA
Amino sequence
MLSARDRRDRHPEEGVVAELQGFAVDKAFLTSHKGILLETELALTLIIFICFTASISAYMAAALLEFFITLAFLFLYATQYYQRFDRINWPCLDFLRCVSAIIIFLVVSFAAVTSRDGAAIAAFVFGIILVSIFAYDAFKIYRTEMAPGASQGDQQ*