ENST00000689459.1 CSN3
Information
- Transcript ID
- ENST00000689459.1
- Genome
- hg38
- Position
- chr4:70,238,382-70,251,474
- Strand
- +
- CDS length
- 549
- Amino acid length
- 183
- Gene symbol
- CSN3
- Gene type
- protein-coding
- Gene description
- casein kappa
- Gene Entrez Gene ID
- 1448
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 70,238,382 | 70,238,455 |
| 2 | 70,244,812 | 70,244,873 |
| 3 | 70,247,818 | 70,247,850 |
| 4 | 70,248,998 | 70,249,493 |
| 5 | 70,251,262 | 70,251,474 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 2 | CDS | 70,244,820 | 70,244,873 |
| 3 | CDS | 70,247,818 | 70,247,850 |
| 4 | CDS | 70,248,998 | 70,249,459 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr4 | 71,104,099 | 71,117,191 | Link |
CDS sequence
ATGAAGAGTTTTCTTCTAGTTGTCAATGCCCTGGCATTAACCCTGCCTTTTTTGGCTGTGGAGGTTCAAAACCAGAAACAACCAGCATGCCATGAGAATGATGAAAGACCATTCTATCAGAAAACAGCTCCATATGTCCCAATGTATTATGTGCCAAATAGCTATCCTTATTATGGAACCAATTTGTACCAACGTAGACCAGCTATAGCAATTAATAATCCATATGTGCCTCGCACATATTATGCAAACCCAGCTGTAGTTAGGCCACATGCCCAAATTCCTCAGCGGCAATACCTGCCAAATAGCCACCCACCCACTGTGGTACGTCGCCCAAACCTGCATCCATCATTTATTGCCATCCCCCCAAAGAAAATTCAGGATAAAATAATCATCCCTACCATCAATACCATTGCTACTGTTGAACCTACACCAGCTCCTGCCACTGAACCAACGGTGGACAGTGTAGTCACTCCAGAAGCTTTTTCAGAGTCCATCATCACGAGCACCCCTGAGACAACCACAGTTGCAGTTACTCCACCTACGGCATAA
Amino sequence
MKSFLLVVNALALTLPFLAVEVQNQKQPACHENDERPFYQKTAPYVPMYYVPNSYPYYGTNLYQRRPAIAINNPYVPRTYYANPAVVRPHAQIPQRQYLPNSHPPTVVRRPNLHPSFIAIPPKKIQDKIIIPTINTIATVEPTPAPATEPTVDSVVTPEAFSESIITSTPETTTVAVTPPTA*