ENST00000680050.1 TBC1D20
Information
- Transcript ID
- ENST00000680050.1
- Genome
- hg38
- Position
- chr20:436,293-462,516
- Strand
- -
- CDS length
- 1,026
- Amino acid length
- 342
- Gene symbol
- TBC1D20
- Gene type
- protein-coding
- Gene description
- TBC1 domain family member 20
- Gene Entrez Gene ID
- 128637
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 8 | 436,293 | 437,598 |
| 7 | 438,550 | 438,841 |
| 6 | 439,108 | 439,295 |
| 5 | 440,248 | 440,389 |
| 4 | 441,588 | 441,689 |
| 3 | 441,857 | 442,043 |
| 2 | 445,050 | 445,130 |
| 1 | 462,336 | 462,516 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 7 | CDS | 438,586 | 438,841 |
| 6 | CDS | 439,108 | 439,295 |
| 5 | CDS | 440,248 | 440,389 |
| 4 | CDS | 441,588 | 441,689 |
| 3 | CDS | 441,857 | 442,043 |
| 2 | CDS | 445,050 | 445,130 |
| 1 | CDS | 462,336 | 462,405 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr20 | 416,937 | 443,160 | Link |
CDS sequence
ATGGCCCTCCGGAGTGCGCAGGGCGACGGCCCCACCTCCGGCCACTGGGACGGCGGCGCGGAGAAGGCAGGGAAGAACCTACGGCAGATGAGCAAGGACTACCAACAAGTGTTGCTGGACGTCCGGCGGTCATTGCGGCGGTTCCCTCCTGGCATGCCAGAGGAACAGAGAGAAGGGCTCCAGGAAGAACTGATTGACATCATCCTCCTCATCTTGGAGCGCAACCCTCAGCTGCACTACTACCAGGGCTACCATGACATTGTGGTCACATTTCTGCTGGTGGTAGGCGAGAGGCTGGCAACATCCCTGGTAGAAAAATTATCTACCCACCACCTCAGGGATTTTATGGATCCAACAATGGACAACACCAAGCATATATTAAACTATCTGATGCCCATCATTGACCAGGTGAATCCAGAGCTCCATGACTTCATGCAGAGTGCTGAGGTAGGGACCATCTTTGCCCTCAGCTGGCTCATCACCTGGTTTGGGCATGTCCTGTCTGACTTCAGGCACGTCGTGCGGTTATATGACTTCTTCCTGGCCTGCCACCCACTGATGCCGATTTACTTTGCAGCCGTGATTGTGTTGTATCGCGAGCAGGAAGTCCTGGACTGTGACTGTGACATGGCCTCGGTCCACCACCTGTTGTCCCAGATCCCTCAGGACTTGCCCTATGAGACACTGATCAGCAGAGCAGGAGACCTTTTTGTTCAGTTTCCCCCATCCGAACTTGCTCGGGAGGCCGCTGCCCAACAGCAAGCTGAGAGGACGGCAGCCTCTACTTTCAAAGACTTTGAGCTGGCATCAGCCCAGCAGAGGCCTGATATGGTGCTGCGGCAGCGGTTTCGGGGACTTCTGCGGCCTGAAGATCGAACAAAAGATGTCCTGACCAAGCCAAGGACCAACCGCTTTGTGAAATTGGCAGTGATGGGGCTGACAGTGGCACTTGGAGCGGCTGCACTGGCTGTGGTGAAAAGTGCCCTGGAATGGGCCCCTAAGTTTCAGCTGCAGCTGTTTCCCTGA
Amino sequence
MALRSAQGDGPTSGHWDGGAEKAGKNLRQMSKDYQQVLLDVRRSLRRFPPGMPEEQREGLQEELIDIILLILERNPQLHYYQGYHDIVVTFLLVVGERLATSLVEKLSTHHLRDFMDPTMDNTKHILNYLMPIIDQVNPELHDFMQSAEVGTIFALSWLITWFGHVLSDFRHVVRLYDFFLACHPLMPIYFAAVIVLYREQEVLDCDCDMASVHHLLSQIPQDLPYETLISRAGDLFVQFPPSELAREAAAQQQAERTAASTFKDFELASAQQRPDMVLRQRFRGLLRPEDRTKDVLTKPRTNRFVKLAVMGLTVALGAAALAVVKSALEWAPKFQLQLFP*