ENST00000550587.6 DEPDC4

Information
Transcript ID
ENST00000550587.6
Genome
hg38
Position
chr12:100,240,062-100,267,079
Strand
-
CDS length
1,491
Amino acid length
497
Gene symbol
DEPDC4
Gene type
protein-coding
Gene description
DEP domain containing 4
Gene Entrez Gene ID
120863
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
10 100,240,062 100,241,845
9 100,242,486 100,242,569
8 100,248,900 100,248,978
7 100,252,176 100,252,301
6 100,252,394 100,252,536
5 100,253,489 100,253,715
4 100,256,049 100,256,226
3 100,262,264 100,262,409
2 100,263,497 100,263,893
1 100,266,920 100,267,079
CDS
Exon number Type Start Stop
9 CDS 100,242,532 100,242,569
8 CDS 100,248,900 100,248,978
7 CDS 100,252,176 100,252,301
6 CDS 100,252,394 100,252,536
5 CDS 100,253,489 100,253,715
4 CDS 100,256,049 100,256,226
3 CDS 100,262,264 100,262,409
2 CDS 100,263,497 100,263,893
1 CDS 100,266,920 100,267,076
Other genome
Genome Chromosome Start End Links
hg19 chr12 100,633,840 100,660,857 Link
CDS sequence
ATGGTGCCAGGGGAGGAGCCAGCGCGCGAGCTTATGGCGGTTCTTTTGACTCCGAGGTTCCGTAGACTTGTCAGTCAGAACGAGCTTCCGGGCCCAGGGCTGAACGGGCCAAGTTCCAGGAACCGTAGAGATGGCTTCTGCCGGAAAAGGAGGACAGGATGCTCTGGTCCTTTTCAAGCTACTCAGCTATGGGATGGTATTATTCACTCTCTTCAGGCCCAAGTGGAAATAAAAAGAAGGAGGCATCATTTACAGACATACAAAGACTGTTTCACTGGTTCTGATGCTGTCGATGTGGTCTTAAGTCATCTTATGCAAAACACGTGCCTAAGTAGCAATGACATCTCTTGTCTTAAAGGGGTTCATCTTTGCCAAGTTCTAATGAATCACAAAGTATTTGAACCAGTAGGAATGAAGAAGCTTTTCAAAAAAGAAAAGGAATTAGAATTTGAAGATTCCAACATTAGTCTCTACAGGTTTCTAGGCAATAAATCATCTTACGATTGTTGCAAAAGACAAAAGGATGCTGAGAATGAGTTCAATGAAACCTTGAGACCAGGATATGAAATGATTTCAAATCCTCTAGCACAGGAGATTGGTGAGGAAAGAATTGAGGAACTTATTCATACAATAAATGGGAATCCAGCTTTATGTCCAAATATCACAGTTCAGAAACCTTTTCTCCGGCTTTCAAAAGAAGATGTTTGGAAAGAACAAACATTATTATGTCTTCTTCAATTGATTCACCTTCCATTCTTGGACAATATTTTGGAGCCTCCAGTTAAAACACAAAATCTTCAACTAAACAAAGAGGAAGATCTTGTTATCACTAACACTTGCCTAGACAGAGAACTTATTCCAAGCTTATGTCTACCTGAAATCGATAACTGGCTTAATGCAGCAATTGAATGCTTGGAGTATTTCCCTGACCAGTTAATAGTTACAGTTAGTCAGCAGTTAATGCAAAACAGAAATGAAGAGACAAGATTGAACAGTCAGAAGAAGATACTCTTTGATGTCATAGCAAAATACTATGCTCAAGAGAGAGATTGCCTATTAACTGATGAGTATTTTGATATTCATTCAGGAATTATTGAACTTTTAGAAAATGAGAAAAGAGCAGAAGCACTTGAAGCAACACAACTATATCTAAGATTGCTGTTGCTGAACATTAGAGAAGAATTACGACGGCTACTTACTTTTATGGCAATGGCATCAGAGCCCAATGCCTACAAGTTGCAAAAACAGTATGATAATAAAACAGTGGTCCTGAAAACTCTTGCCAAATCAGTTTTGCAAGCCAAATCATTATTAAAAGTGCGGGCAGAACAACTGGTCTGGTTTCCACTGGAGTACCACTCTGAGCTCTTCAAGACACCAGTTACTTTATTGGATCTGGTTAGTAAGAAACTTAAGAAGCTTCTACATGGAGAAGATGCAGATGCCATATCAGGTATGGCTGAAAATAACAGCTACACATCTACAGCTTAG
Amino sequence
MVPGEEPARELMAVLLTPRFRRLVSQNELPGPGLNGPSSRNRRDGFCRKRRTGCSGPFQATQLWDGIIHSLQAQVEIKRRRHHLQTYKDCFTGSDAVDVVLSHLMQNTCLSSNDISCLKGVHLCQVLMNHKVFEPVGMKKLFKKEKELEFEDSNISLYRFLGNKSSYDCCKRQKDAENEFNETLRPGYEMISNPLAQEIGEERIEELIHTINGNPALCPNITVQKPFLRLSKEDVWKEQTLLCLLQLIHLPFLDNILEPPVKTQNLQLNKEEDLVITNTCLDRELIPSLCLPEIDNWLNAAIECLEYFPDQLIVTVSQQLMQNRNEETRLNSQKKILFDVIAKYYAQERDCLLTDEYFDIHSGIIELLENEKRAEALEATQLYLRLLLLNIREELRRLLTFMAMASEPNAYKLQKQYDNKTVVLKTLAKSVLQAKSLLKVRAEQLVWFPLEYHSELFKTPVTLLDLVSKKLKKLLHGEDADAISGMAENNSYTSTA*