ENST00000329078.8 SPNS2

Information
Transcript ID
ENST00000329078.8
Genome
hg38
Position
chr17:4,498,881-4,539,035
Strand
+
CDS length
1,650
Amino acid length
550
Gene symbol
SPNS2
Gene type
protein-coding
Gene description
SPNS lysolipid transporter 2, sphingosine-1-phosphate
Gene Entrez Gene ID
124976
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 4,498,881 4,499,417
2 4,513,247 4,513,312
3 4,525,057 4,525,193
4 4,530,632 4,530,783
5 4,531,053 4,531,119
6 4,532,542 4,532,684
7 4,532,977 4,533,129
8 4,533,243 4,533,432
9 4,533,788 4,533,853
10 4,536,076 4,536,174
11 4,536,263 4,536,426
12 4,536,900 4,536,946
13 4,537,453 4,539,035
CDS
Exon number Type Start Stop
1 CDS 4,499,048 4,499,417
2 CDS 4,513,247 4,513,312
3 CDS 4,525,057 4,525,193
4 CDS 4,530,632 4,530,783
5 CDS 4,531,053 4,531,119
6 CDS 4,532,542 4,532,684
7 CDS 4,532,977 4,533,129
8 CDS 4,533,243 4,533,432
9 CDS 4,533,788 4,533,853
10 CDS 4,536,076 4,536,174
11 CDS 4,536,263 4,536,426
12 CDS 4,536,900 4,536,942
Other genome
Genome Chromosome Start End Links
hg19 chr17 4,402,176 4,442,330 Link
CDS sequence
ATGATGTGCCTGGAATGCGCCTCGGCGGCGGCGGGCGGCGCGGAGGAGGAGGAGGCGGACGCGGAGCGGCGGCGCCGGCGCCGGGGGGCGCAGCGAGGGGCTGGCGGTAGCGGTTGCTGCGGGGCGCGGGGCGCGGGCGGCGCTGGAGTCTCGGCCGCGGGCGATGAGGTGCAGACGCTGTCGGGCAGCGTAAGGCGGGCCCCGACCGGACCCCCCGGCACCCCCGGCACCCCCGGCTGCGCAGCTACTGCAAAGGGCCCCGGCGCTCAGCAGCCCAAACCGGCCAGCTTGGGCCGCGGGCGGGGGGCAGCCGCCGCCATCCTCAGCTTGGGCAACGTGCTCAACTACCTGGACAGGTACACCGTGGCAGGCGTCCTTCTGGACATCCAGCAGCACTTTGGGGTCAAGGACCGAGGCGCCGGCCTGCTGCAGTCAGTGTTCATCTGTAGCTTCATGGTGGCTGCCCCCATCTTCGGCTACCTGGGCGACCGCTTCAACAGGAAGGTGATTCTCAGCTGCGGCATTTTCTTCTGGTCGGCCGTCACCTTCTCCAGCTCCTTCATTCCCCAGCAGTACTTCTGGCTGCTGGTCCTGTCCCGGGGGCTGGTGGGCATCGGGGAGGCCAGCTACTCCACCATCGCCCCCACTATCATTGGCGACCTCTTCACCAAGAACACGCGTACGCTCATGCTGTCCGTCTTCTACTTCGCCATCCCACTGGGCAGTGGCCTGGGCTACATTACTGGCTCCAGCGTGAAGCAGGCAGCCGGAGACTGGCACTGGGCATTGCGGGTGTCCCCTGTCCTGGGCATGATCACAGGAACACTCATCCTCATTCTGGTCCCAGCCACTAAAAGGGGTCATGCCGACCAGCTCGGGGACCAGCTCAAGGCCCGGACCTCATGGCTCCGAGATATGAAGGCCCTGATTCGAAACCGCAGCTACGTCTTCTCCTCCCTGGCCACGTCGGCTGTCTCCTTCGCCACGGGGGCCCTGGGCATGTGGATCCCGCTCTACCTGCACCGCGCCCAAGTTGTGCAGAAGACAGCAGAGACGTGCAACAGCCCGCCCTGTGGGGCCAAGGACAGCCTCATCTTTGGGGCCATCACCTGCTTTACGGGATTTCTGGGCGTGGTCACGGGGGCAGGAGCCACGCGCTGGTGCCGCCTGAAGACCCAGCGGGCCGACCCACTGGTGTGTGCCGTGGGCATGCTGGGCTCTGCCATCTTCATCTGCCTGATCTTCGTGGCTGCCAAGAGCAGCATCGTAGGAGCCTATATCTGTATCTTCGTCGGGGAGACGCTGCTGTTTTCTAACTGGGCCATCACTGCAGACATCCTCATGTACGTGGTCATCCCCACGCGGCGCGCCACTGCCGTGGCCTTGCAGAGCTTCACCTCCCACCTGCTGGGGGACGCCGGGAGCCCCTACCTCATTGGCTTTATCTCAGACCTGATCCGCCAGAGCACTAAGGACTCCCCGCTCTGGGAGTTCCTGAGCCTGGGCTACGCGCTCATGCTCTGCCCTTTCGTCGTGGTCCTGGGCGGCATGTTCTTCCTCGCCACTGCGCTCTTCTTCGTCAGCGACCGCGCCAGGGCTGAGCAGCAGGTGAACCAGCTGGCGATGCCGCCCGCATCTGTGAAAGTCTGA
Amino sequence
MMCLECASAAAGGAEEEEADAERRRRRRGAQRGAGGSGCCGARGAGGAGVSAAGDEVQTLSGSVRRAPTGPPGTPGTPGCAATAKGPGAQQPKPASLGRGRGAAAAILSLGNVLNYLDRYTVAGVLLDIQQHFGVKDRGAGLLQSVFICSFMVAAPIFGYLGDRFNRKVILSCGIFFWSAVTFSSSFIPQQYFWLLVLSRGLVGIGEASYSTIAPTIIGDLFTKNTRTLMLSVFYFAIPLGSGLGYITGSSVKQAAGDWHWALRVSPVLGMITGTLILILVPATKRGHADQLGDQLKARTSWLRDMKALIRNRSYVFSSLATSAVSFATGALGMWIPLYLHRAQVVQKTAETCNSPPCGAKDSLIFGAITCFTGFLGVVTGAGATRWCRLKTQRADPLVCAVGMLGSAIFICLIFVAAKSSIVGAYICIFVGETLLFSNWAITADILMYVVIPTRRATAVALQSFTSHLLGDAGSPYLIGFISDLIRQSTKDSPLWEFLSLGYALMLCPFVVVLGGMFFLATALFFVSDRARAEQQVNQLAMPPASVKV*