ENST00000686220.1 REEP1
Information
- Transcript ID
- ENST00000686220.1
- Genome
- hg38
- Position
- chr2:86,215,068-86,337,626
- Strand
- -
- CDS length
- 672
- Amino acid length
- 224
- Gene symbol
- REEP1
- Gene type
- protein-coding
- Gene description
- receptor accessory protein 1
- Gene Entrez Gene ID
- 65055
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 7 | 86,215,068 | 86,217,110 |
| 6 | 86,223,075 | 86,223,275 |
| 5 | 86,232,625 | 86,232,802 |
| 4 | 86,251,957 | 86,252,070 |
| 3 | 86,254,694 | 86,254,814 |
| 2 | 86,263,965 | 86,264,041 |
| 1 | 86,337,479 | 86,337,626 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 6 | CDS | 86,223,118 | 86,223,275 |
| 5 | CDS | 86,232,625 | 86,232,802 |
| 4 | CDS | 86,251,957 | 86,252,070 |
| 3 | CDS | 86,254,694 | 86,254,814 |
| 2 | CDS | 86,263,965 | 86,264,041 |
| 1 | CDS | 86,337,479 | 86,337,502 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr2 | 86,442,191 | 86,564,749 | Link |
CDS sequence
ATGGATCATCTCCAGGCTGGTGGTGTCAAATGGATGATGTACTGGATTATATTTGCACTTTTCACCACAGCAGAGACATTCACAGACATCTTCCTTTGTTGGTTTCCATTCTATTATGAACTAAAAATAGCATTTGTAGCCTGGCTGCTGTCTCCCTACACAAAAGGCTCCAGCCTCCTGTACAGGAAGTTTGTACATCCCACGCTATCTTCAAAAGAAAAGGAAATCGATGATTGTCTGGTCCAAGCAAAAGACCGAAGTTACGATGCCCTTGTGCACTTCGGGAAGCGGGGCTTGAACGTGGCCGCCACAGCGGCTGTGATGGCTGCTTCCAAGGGACAGGGTGCCTTATCGGAGAGACTGCGGAGCTTCAGCATGCAGGACCTCACCACCATCAGGGGAGACGGCGCCCCTGCTCCCTCGGGCCCCCCACCACCGGGGTCTGGGCGGGCCAGCGGCAAACACGGCCAGCCTAAGATGTCCAGGAGTGCTTCTGAGAGCGCTAGCAGCTCAGAGAGAAGAGGTGGAGCCTGCAGCCCTGGCTGCTGTAGCCCTGCTGACACATTTGCTAATACAGAAACATCAGCCAAGGCCACACACCCATTCCCCTGCTGTGGAAGACGGCAGAAACCCTGCCCTTTCCTAGAAGCAACCCAGCTTTGGGCATCATAG
Amino sequence
MDHLQAGGVKWMMYWIIFALFTTAETFTDIFLCWFPFYYELKIAFVAWLLSPYTKGSSLLYRKFVHPTLSSKEKEIDDCLVQAKDRSYDALVHFGKRGLNVAATAAVMAASKGQGALSERLRSFSMQDLTTIRGDGAPAPSGPPPPGSGRASGKHGQPKMSRSASESASSSERRGGACSPGCCSPADTFANTETSAKATHPFPCCGRRQKPCPFLEATQLWAS*