ENST00000313486.12 PITPNA
Information
- Transcript ID
- ENST00000313486.12
- Genome
- hg38
- Position
- chr17:1,517,718-1,562,792
- Strand
- -
- CDS length
- 813
- Amino acid length
- 271
- Gene symbol
- PITPNA
- Gene type
- protein-coding
- Gene description
- phosphatidylinositol transfer protein alpha
- Gene Entrez Gene ID
- 5306
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 12 | 1,517,718 | 1,520,538 |
| 11 | 1,521,579 | 1,521,645 |
| 10 | 1,534,099 | 1,534,221 |
| 9 | 1,535,182 | 1,535,292 |
| 8 | 1,535,441 | 1,535,518 |
| 7 | 1,538,869 | 1,538,952 |
| 6 | 1,541,566 | 1,541,640 |
| 5 | 1,543,020 | 1,543,027 |
| 4 | 1,548,296 | 1,548,387 |
| 3 | 1,553,004 | 1,553,149 |
| 2 | 1,558,529 | 1,558,559 |
| 1 | 1,562,541 | 1,562,792 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 11 | CDS | 1,521,601 | 1,521,645 |
| 10 | CDS | 1,534,099 | 1,534,221 |
| 9 | CDS | 1,535,182 | 1,535,292 |
| 8 | CDS | 1,535,441 | 1,535,518 |
| 7 | CDS | 1,538,869 | 1,538,952 |
| 6 | CDS | 1,541,566 | 1,541,640 |
| 5 | CDS | 1,543,020 | 1,543,027 |
| 4 | CDS | 1,548,296 | 1,548,387 |
| 3 | CDS | 1,553,004 | 1,553,149 |
| 2 | CDS | 1,558,529 | 1,558,559 |
| 1 | CDS | 1,562,541 | 1,562,560 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr17 | 1,421,012 | 1,466,086 | Link |
CDS sequence
ATGGTGCTGCTCAAGGAGTATCGAGTAATCCTGCCTGTGTCTGTAGATGAGTATCAAGTGGGGCAGCTGTATTCTGTGGCTGAGGCCAGTAAAAATGAAACGGGTGGTGGCGAAGGCGTGGAGGTCCTGGTGAATGAGCCCTACGAGAAGGACGGTGAGAAAGGCCAGTACACACACAAGATCTACCACCTGCAGAGCAAAGTACCCACGTTTGTTCGAATGCTGGCCCCAGAGGGAGCCCTGAATATACACGAGAAAGCCTGGAATGCTTACCCCTACTGCAGAACCGTTATTACAAATGAGTACATGAAAGAAGACTTTCTGATTAAAATTGAAACCTGGCACAAACCAGATCTTGGCACGCAGGAGAATGTGCATAAGCTGGAGCCTGAGGCGTGGAAACACGTGGAAGCCGTATATATAGACATTGCAGATCGAAGCCAAGTGCTCAGCAAGGATTACAAGGCAGAGGAAGACCCAGCAAAATTTAAATCTATCAAAACAGGCCGAGGACCCTTGGGCCCCAATTGGAAGCAAGAGCTTGTAAACCAGAAGGACTGCCCATATATGTGTGCATACAAACTGGTGACCGTCAAGTTCAAGTGGTGGGGCCTGCAGAACAAAGTGGAGAACTTCATCCATAAGCAAGAGAGGCGTCTGTTTACAAACTTCCACAGGCAGCTGTTCTGTTGGCTCGATAAGTGGGTTGACCTGACCATGGACGACATTCGAAGGATGGAAGAAGAGACGAAGAGACAGCTGGATGAAATGAGACAAAAGGACCCAGTGAAAGGAATGACAGCAGATGACTAA
Amino sequence
MVLLKEYRVILPVSVDEYQVGQLYSVAEASKNETGGGEGVEVLVNEPYEKDGEKGQYTHKIYHLQSKVPTFVRMLAPEGALNIHEKAWNAYPYCRTVITNEYMKEDFLIKIETWHKPDLGTQENVHKLEPEAWKHVEAVYIDIADRSQVLSKDYKAEEDPAKFKSIKTGRGPLGPNWKQELVNQKDCPYMCAYKLVTVKFKWWGLQNKVENFIHKQERRLFTNFHRQLFCWLDKWVDLTMDDIRRMEEETKRQLDEMRQKDPVKGMTADD*