ENST00000548823.1 CTDSP2

Information
Transcript ID
ENST00000548823.1
Genome
hg38
Position
chr12:57,822,800-57,846,704
Strand
-
CDS length
297
Amino acid length
99
Gene symbol
CTDSP2
Gene type
protein-coding
Gene description
CTD small phosphatase 2
Gene Entrez Gene ID
10106
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency
TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence
Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
4 57,822,800 57,823,727
3 57,823,904 57,823,957
2 57,829,544 57,829,596
1 57,846,372 57,846,704
CDS
Exon number Type Start Stop
4 CDS 57,823,602 57,823,727
3 CDS 57,823,904 57,823,957
2 CDS 57,829,544 57,829,596
1 CDS 57,846,372 57,846,435
Other genome
Genome Chromosome Start End Links
hg19 chr12 58,216,583 58,240,487 Link
CDS sequence
ATGGAACACGGCTCCATCATCACCCAGGCGCGGAGGGAAGACGCCCTGGTGCTCACCAAGCAAGGCCTGGTCTCCAAGTCCTCTCCTAAGAAGCCTCGTGGACGTAACATCTTCAAGACCCTCATCCTGGACAACTCGCCTGCTTCTTACATATTCCACCCCGAGAATGCAGTGCCTGTGCAGTCCTGGTTTGATGACATGGCAGACACTGAGTTGCTGAACCTGATCCCAATCTTTGAGGAGCTGAGCGGAGCAGAGGACGTCTACACCAGCCTTGGGCAGCTGCGGGCCCCTTAG
Amino sequence
MEHGSIITQARREDALVLTKQGLVSKSSPKKPRGRNIFKTLILDNSPASYIFHPENAVPVQSWFDDMADTELLNLIPIFEELSGAEDVYTSLGQLRAP*