ENST00000496623.5 PHF11
Information
- Transcript ID
- ENST00000496623.5
- Genome
- hg38
- Position
- chr13:49,495,970-49,518,834
- Strand
- +
- CDS length
- 480
- Amino acid length
- 160
- Gene symbol
- PHF11
- Gene type
- protein-coding
- Gene description
- PHD finger protein 11
- Gene Entrez Gene ID
- 51131
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 49,495,970 | 49,496,095 |
| 2 | 49,506,635 | 49,506,756 |
| 3 | 49,513,059 | 49,513,166 |
| 4 | 49,518,018 | 49,518,834 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 49,496,002 | 49,496,095 |
| 2 | CDS | 49,506,635 | 49,506,756 |
| 3 | CDS | 49,513,059 | 49,513,166 |
| 4 | CDS | 49,518,018 | 49,518,173 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr13 | 50,070,106 | 50,092,970 | Link |
CDS sequence
ATGGCCCAGGCGTCGCCGCCCCGGCCCGAGAGGGTGCTCGGCGCCAGCAGCCCGGAGGCCCGGCCCGCGCAGGAGGCGCTCCTCCTTCCCACCGGTGTCTTTCAGGTTGCAGAAAAGATGGAAAAAAGGACATGTGCACTCTGCCCCAAAGATGTCGAATATAATGTCCTATACTTTGCACAATCAGAGAATATAGCTGCTCATGAGAATTGTTTGCTGTATTCTTCAGGACTTGTGGAATGTGAGGATCAGGATCCACTTAATCCTGATAGAAGTTTTGATGTGGAATCAGTAAAGAAAGAAATCCAGAGAGGAAGGAAGTTGAAATGCAAATTTTGTCATAAAAGAGGAGCCACCGTGGGATGTGATTTAAAAAACTGTAACAAGAATTACCACTTTTTCTGTGCCAAGAAGGACGACGCAGTTCCACAGTCTGATGGAGTTCGAGGAATTTATAAGTATTTAATAAAACATTTTTAA
Amino sequence
MAQASPPRPERVLGASSPEARPAQEALLLPTGVFQVAEKMEKRTCALCPKDVEYNVLYFAQSENIAAHENCLLYSSGLVECEDQDPLNPDRSFDVESVKKEIQRGRKLKCKFCHKRGATVGCDLKNCNKNYHFFCAKKDDAVPQSDGVRGIYKYLIKHF*