ENST00000545200.5 NOP2
Information
- Transcript ID
- ENST00000545200.5
- Genome
- hg38
- Position
- chr12:6,556,871-6,568,282
- Strand
- -
- CDS length
- 1,887
- Amino acid length
- 629
- Gene symbol
- NOP2
- Gene type
- protein-coding
- Gene description
- NOP2 nucleolar protein
- Gene Entrez Gene ID
- 4839
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 17 | 6,556,871 | 6,557,642 |
| 16 | 6,558,016 | 6,558,137 |
| 15 | 6,560,098 | 6,560,326 |
| 14 | 6,560,447 | 6,560,569 |
| 13 | 6,560,698 | 6,560,787 |
| 12 | 6,560,931 | 6,561,070 |
| 11 | 6,561,664 | 6,561,804 |
| 10 | 6,561,884 | 6,561,971 |
| 9 | 6,563,081 | 6,563,170 |
| 8 | 6,563,315 | 6,563,514 |
| 7 | 6,563,614 | 6,563,771 |
| 6 | 6,563,891 | 6,563,946 |
| 5 | 6,566,101 | 6,566,324 |
| 4 | 6,566,529 | 6,566,617 |
| 3 | 6,566,777 | 6,566,822 |
| 2 | 6,567,816 | 6,567,922 |
| 1 | 6,568,207 | 6,568,282 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 16 | CDS | 6,558,028 | 6,558,137 |
| 15 | CDS | 6,560,098 | 6,560,326 |
| 14 | CDS | 6,560,447 | 6,560,569 |
| 13 | CDS | 6,560,698 | 6,560,787 |
| 12 | CDS | 6,560,931 | 6,561,070 |
| 11 | CDS | 6,561,664 | 6,561,804 |
| 10 | CDS | 6,561,884 | 6,561,971 |
| 9 | CDS | 6,563,081 | 6,563,170 |
| 8 | CDS | 6,563,315 | 6,563,514 |
| 7 | CDS | 6,563,614 | 6,563,771 |
| 6 | CDS | 6,563,891 | 6,563,946 |
| 5 | CDS | 6,566,101 | 6,566,324 |
| 4 | CDS | 6,566,529 | 6,566,617 |
| 3 | CDS | 6,566,777 | 6,566,822 |
| 2 | CDS | 6,567,816 | 6,567,918 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr12 | 6,666,037 | 6,677,448 | Link |
CDS sequence
ATGGGGCGCAAGTTGGACCCTACGAAGGAGAAGCGGGGGCCAGGCCGAAAGGCCCGGAAGCAGAAGGGTGCCGAGACAGAACTCGTCAGATTCTTGCCTGCAGTAAGTGACGAAAATTCCAAGAGGCTGTCTAGTCGTGCTCGAAAGAGGGCAGCCAAGAGGAGATTGGGCTCTGTTGAAGCCCCTAAGACAAATAAGTCTCCTGAGGCCAAACCATTGCCTGGAAAGCTACCAAAAGGAGCTGTCCAGACAGCTGGTAAGAAGGGACCCCAGTCCCTATTTAATGCTCCTCGAGGCAAGAAGCGCCCAGCACCTGGCAGTGATGAGGAAGAGGAGGAGGAAGACTCTGAAGAAGATGGTATGGTGAACCACGGGGACCTCTGGGGCTCCGAGGACGATGCTGATACGGTAGATGACTATGGAGCTGACTCCAACTCTGAGGATGAGGAGGAAGGTGAAGCGTTGCTGCCCATTGAAAGAGCTGCTCGGAAGCAGAAGGCCCGGGAAGCTGCTGCTGGGATCCAGTGGAGTGAAGAGGAGACCGAGGACGAGGAGGAAGAGAAAGAAGTGACCCCTGAGTCAGGCCCCCCAAAGGTGGAAGAGGCAGATGGGGGCCTGCAGATCAATGTGGATGAGGAACCATTTGTGCTGCCCCCTGCTGGGGAGATGGAGCAGGATGCCCAGGCTCCAGACCTGCAACGAGTTCACAAGCGGATCCAGGATATTGTGGGAATTCTGCGTGATTTTGGGGCTCAGCGGGAGGAAGGGCGGTCTCGTTCTGAATACCTGAACCGGCTCAAGAAGGATCTGGCCATTTACTACTCCTATGGAGACTTCCTGCTTGGCAAGCTCATGGACCTCTTCCCTCTGTCTGAGCTGGTGGAGTTCTTAGAAGCTAATGAGGTGCCTCGGCCCGTCACCCTCCGGACCAATACCTTGAAAACCCGACGCCGAGACCTTGCACAGGCTCTAATCAATCGTGGGGTTAACCTGGATCCCCTGGGCAAGTGGTCAAAGACTGGACTAGTGGTGTATGATTCTTCTGTGCCCATTGGTGCTACCCCCGAGTACCTGGCTGGGCACTACATGCTGCAGGGAGCCTCCAGCATGTTGCCCGTCATGGCCTTGGCACCCCAGGAACATGAGCGGATCCTGGACATGTGTTGTGCCCCTGGAGGAAAGACCAGCTACATGGCCCAGCTGATGAAGAACACGGGTGTGATCCTTGCCAATGACGCCAATGCTGAGCGGCTCAAGAGTGTTGTGGGCAACTTGCATCGGCTGGGAGTCACCAACACCATTATCAGCCACTATGATGGGCGCCAGTTCCCCAAGGTGGTGGGGGGCTTTGACCGAGTACTGCTGGATGCTCCCTGCAGTGGCACTGGGGTCATCTCCAAGGATCCAGCCGTGAAGACTAACAAGGATGAGAAGGACATCCTGCGCTGTGCTCACCTCCAGAAGGAGTTGCTCCTGAGTGCTATTGACTCTGTCAATGCGACCTCCAAGACAGGAGGCTACCTGGTTTACTGCACCTGTTCTATCACAGTAGAAGAGAATGAGTGGGTGGTAGACTATGCTCTGAAAAAGAGGAATGTGCGACTGGTGCCCACGGGCCTAGACTTTGGCCAGGAAGGTTTTACCCGCTTTCGAGAAAGGCGCTTCCACCCCAGTCTGCGTTCTACCCGACGCTTCTACCCTCATACCCACAATATGGATGGGTTCTTCATTGCCAAGTTCAAGAAATTTTCCAATTCTATCCCTCAGTCCCAGACAGACGGTGTCTTGCTTTGTCGCTCAGGCTGGACTGCAGTGGTGCAATCTCAGCTCATTGCAACCTCCACCTTCCAGGTTCAAGCGATTCTTGTGCCTCAGACTCCCAAGTAG
Amino sequence
MGRKLDPTKEKRGPGRKARKQKGAETELVRFLPAVSDENSKRLSSRARKRAAKRRLGSVEAPKTNKSPEAKPLPGKLPKGAVQTAGKKGPQSLFNAPRGKKRPAPGSDEEEEEEDSEEDGMVNHGDLWGSEDDADTVDDYGADSNSEDEEEGEALLPIERAARKQKAREAAAGIQWSEEETEDEEEEKEVTPESGPPKVEEADGGLQINVDEEPFVLPPAGEMEQDAQAPDLQRVHKRIQDIVGILRDFGAQREEGRSRSEYLNRLKKDLAIYYSYGDFLLGKLMDLFPLSELVEFLEANEVPRPVTLRTNTLKTRRRDLAQALINRGVNLDPLGKWSKTGLVVYDSSVPIGATPEYLAGHYMLQGASSMLPVMALAPQEHERILDMCCAPGGKTSYMAQLMKNTGVILANDANAERLKSVVGNLHRLGVTNTIISHYDGRQFPKVVGGFDRVLLDAPCSGTGVISKDPAVKTNKDEKDILRCAHLQKELLLSAIDSVNATSKTGGYLVYCTCSITVEENEWVVDYALKKRNVRLVPTGLDFGQEGFTRFRERRFHPSLRSTRRFYPHTHNMDGFFIAKFKKFSNSIPQSQTDGVLLCRSGWTAVVQSQLIATSTFQVQAILVPQTPK*