ENST00000612152.4 TSPAN6
Information
- Transcript ID
- ENST00000612152.4
- Genome
- hg38
- Position
- chrX:100,627,109-100,637,104
- Strand
- -
- CDS length
- 390
- Amino acid length
- 130
- Gene symbol
- TSPAN6
- Gene type
- protein-coding
- Gene description
- tetraspanin 6
- Gene Entrez Gene ID
- 7105
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 7 | 100,627,109 | 100,629,986 |
| 6 | 100,630,759 | 100,630,866 |
| 5 | 100,633,405 | 100,633,539 |
| 4 | 100,633,931 | 100,634,029 |
| 3 | 100,635,178 | 100,635,252 |
| 2 | 100,635,558 | 100,635,746 |
| 1 | 100,636,793 | 100,637,104 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 6 | CDS | 100,630,798 | 100,630,866 |
| 5 | CDS | 100,633,405 | 100,633,539 |
| 4 | CDS | 100,633,931 | 100,634,029 |
| 3 | CDS | 100,635,178 | 100,635,252 |
| 2 | CDS | 100,635,558 | 100,635,569 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chrX | 99,882,106 | 99,892,101 | Link |
CDS sequence
ATGCTAAAACTGTATGCAATGTTTCTGACTCTCGTTTTTTTGGTCGAACTGGTCGCTGCCATCGTAGGATTTGTTTTCAGACATGAGATTAAGAACAGCTTTAAGAATAATTATGAGAAGGCTTTGAAGCAGTATAACTCTACAGGAGATTATAGAAGCCATGCAGTAGACAAGATCCAAAATACGTTGCATTGTTGTGGTGTCACCGATTATAGAGATTGGACAGATACTAATTATTACTCAGAAAAAGGATTTCCTAAGAGTTGCTGTAAACTTGAAGATTGTACTCCACAGAGAGATGCAGACAAAGTAAACAATGAACTGATTGGAATCTTTCTCGCCTACTGCCTCTCTCGTGCCATAACAAATAACCAGTATGAGATAGTGTAA
Amino sequence
MLKLYAMFLTLVFLVELVAAIVGFVFRHEIKNSFKNNYEKALKQYNSTGDYRSHAVDKIQNTLHCCGVTDYRDWTDTNYYSEKGFPKSCCKLEDCTPQRDADKVNNELIGIFLAYCLSRAITNNQYEIV*