ENST00000007390.3 TSR3
Information
- Transcript ID
- ENST00000007390.3
- Genome
- hg38
- Position
- chr16:1,349,240-1,351,878
- Strand
- -
- CDS length
- 939
- Amino acid length
- 313
- Gene symbol
- TSR3
- Gene type
- protein-coding
- Gene description
- TSR3 ribosome maturation factor
- Gene Entrez Gene ID
- 115939
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 6 | 1,349,240 | 1,349,608 |
| 5 | 1,349,889 | 1,349,952 |
| 4 | 1,350,058 | 1,350,234 |
| 3 | 1,350,807 | 1,351,000 |
| 2 | 1,351,379 | 1,351,598 |
| 1 | 1,351,693 | 1,351,878 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 6 | CDS | 1,349,437 | 1,349,608 |
| 5 | CDS | 1,349,889 | 1,349,952 |
| 4 | CDS | 1,350,058 | 1,350,234 |
| 3 | CDS | 1,350,807 | 1,351,000 |
| 2 | CDS | 1,351,379 | 1,351,598 |
| 1 | CDS | 1,351,693 | 1,351,804 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr16 | 1,399,241 | 1,401,879 | Link |
CDS sequence
ATGGGCCGCAGGAGGGCAGCGCGCGGGCCGGGGGCGGAAGGCGGCCGCCCTCGGCACCTCCCGACGCGCTCCCTGGAGGCCTTCGCCGAGGAGGTCGGCGCCGCGCTGCAGGCTTCCGTGGAGCCAGGGGCGGCTGACGGCGAGGGCGGCCCGGGCCCGGCGGCGCTGCCCTGCACGCTGGCCATGTGGGAGTTGGGCCACTGCGACCCCCGGCGCTGCACGGGCCGCAAGCTGGCCCGCCTGGGGCTGGTGCGCTGCCTGCGCCTGGGCCACAGATTCGGCGGTCTGGTGCTGAGCCCCGTGGGCAAGCAGTACGCGTCCCCCGCAGACAGACAGCTGGTGGCGCAGTCTGGGGTCGCCGTCATCGACTGCTCCTGGGCCAGGCTGGACGAGACACCGTTTGGGAAGATGCGAGGGAGCCACTTGCGCCTGTTGCCCTACCTGGTGGCCGCCAACCCCGTGAACTATGGCCGGCCCTACAGACTTTCCTGCGTGGAAGCGTTTGCTGCCACCTTCTGCATCGTAGGCTTTCCAGACCTTGCTGTCATTTTGCTGCGGAAGTTTAAATGGGGCAAGGGCTTCTTGGACCTGAACCGCCAGCTCCTGGACAAGTACGCGGCCTGCGGCAGCCCGGAGGAGGTGCTGCAGGCGGAGCAGGAGTTCTTGGCCAATGCCAAGGAGAGCCCCCAGGAGGAGGAGATCGATCCCTTCGATGTGGATTCAGGGAGAGAGTTTGGAAACCCCAACAGGCCTGTGGCCAGCACCCGGCTGCCCTCGGACACTGATGACAGTGATGCGTCTGAGGACCCAGGGCCTGGCGCCGAGCGCGGAGGAGCCAGCAGCAGCTGCTGTGAAGAGGAGCAGACGCAGGGACGGGGGGCTGAGGCCAGGGCCCCGGCTGAGGTTTGGAAAGGAATCAAGAAACGGCAGAGAGACTGA
Amino sequence
MGRRRAARGPGAEGGRPRHLPTRSLEAFAEEVGAALQASVEPGAADGEGGPGPAALPCTLAMWELGHCDPRRCTGRKLARLGLVRCLRLGHRFGGLVLSPVGKQYASPADRQLVAQSGVAVIDCSWARLDETPFGKMRGSHLRLLPYLVAANPVNYGRPYRLSCVEAFAATFCIVGFPDLAVILLRKFKWGKGFLDLNRQLLDKYAACGSPEEVLQAEQEFLANAKESPQEEEIDPFDVDSGREFGNPNRPVASTRLPSDTDDSDASEDPGPGAERGGASSSCCEEEQTQGRGAEARAPAEVWKGIKKRQRD*