ENST00000476556.5 RERE

Information
Transcript ID
ENST00000476556.5
Genome
hg19
Position
chr1:8,414,153-8,483,726
Strand
-
CDS length
3,039
Amino acid length
1,013
Gene symbol
RERE
Gene type
protein-coding
Gene description
arginine-glutamic acid dipeptide repeats
Gene Entrez Gene ID
473
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
13 8,414,153 8,415,180
12 8,415,479 8,415,659
11 8,416,160 8,416,306
10 8,418,256 8,418,976
9 8,419,824 8,420,046
8 8,420,172 8,421,550
7 8,421,823 8,421,936
6 8,422,743 8,422,904
5 8,424,116 8,424,315
4 8,424,806 8,424,898
3 8,425,872 8,426,034
2 8,482,787 8,482,867
1 8,483,621 8,483,726
CDS
Exon number Type Start Stop
13 CDS 8,415,147 8,415,180
12 CDS 8,415,479 8,415,659
11 CDS 8,416,160 8,416,306
10 CDS 8,418,256 8,418,976
9 CDS 8,419,824 8,420,046
8 CDS 8,420,172 8,421,550
7 CDS 8,421,823 8,421,936
6 CDS 8,422,743 8,422,904
5 CDS 8,424,116 8,424,193
Other genome
Genome Chromosome Start End Links
hg38 chr1 8,354,093 8,423,666 Link
CDS sequence
ATGTTCAAACCCGTCAAGGAAGAGGATGATGGGCTCAGTGGGAAGCATAGCATGAGGACACGGCGGAGTCGGGGCTCGATGTCGACACTACGCAGTGGTCGGAAGAAGCAGCCAGCCAGCCCTGATGGTCGCACCTCACCCATCAATGAAGACATCCGCTCCAGCGGCCGGAACTCCCCCAGCGCTGCCAGTACCTCCAGCAATGACAGTAAAGCAGAGACAGTGAAGAAGTCGGCCAAGAAGGTGAAGGAGGAAGCCTCTTCCCCTCTTAAGAGTAACAAACGCCAGCGGGAGAAGGTGGCCTCTGATACGGAGGAGGCTGACAGGACCAGCTCCAAGAAGACAAAAACGCAGGAGATCAGCAGGCCCAACTCGCCATCTGAAGGTGAGGGAGAGAGTTCAGACAGTCGCAGCGTCAACGATGAGGGTAGCAGTGACCCCAAAGACATCGACCAGGACAATCGCAGCACGTCCCCGAGCATCCCCAGCCCCCAGGACAATGAGAGTGACTCGGACTCGTCAGCCCAGCAGCAGATGCTGCAGGCCCAGCCCCCAGCCTTGCAGGCTCCCACTGGGGTCACCCCAGCTCCCTCCTCAGCTCCTCCAGGGACCCCTCAGCTGCCCACGCCAGGGCCCACGCCCTCTGCCACTGCAGTTCCCCCACAGGGCTCCCCCACGGCCTCCCAGGCCCCTAACCAGCCACAGGCTCCCACAGCGCCTGTTCCCCACACCCACATCCAACAGGCACCGGCCTTGCACCCCCAGCGGCCGCCCTCACCGCATCCCCCGCCGCATCCCTCGCCACATCCCCCGCTGCAGCCTCTGACTGGGTCGGCGGGCCAGCCTTCTGCACCCTCTCATGCCCAGCCCCCACTGCACGGTCAGGGCCCACCCGGCCCTCACAGCCTGCAGGCTGGGCCCCTGCTGCAGCACCCAGGCCCCCCACAGCCCTTTGGCCTCCCTCCCCAGGCCTCCCAAGGCCAGGCCCCTCTGGGGACCTCCCCAGCAGCAGCGTACCCTCACACCTCCCTGCAGCTGCCAGCCTCTCAGTCAGCGCTGCAGTCCCAACAGCCTCCACGGGAGCAGCCCCTGCCACCAGCGCCCTTGGCCATGCCCCACATCAAGCCCCCGCCTACCACTCCCATCCCCCAGCTGCCGGCGCCACAGGCCCACAAGCACCCTCCCCACCTCTCGGGGCCCTCACCCTTCTCCATGAATGCCAACCTGCCTCCCCCTCCAGCCCTGAAGCCCCTGAGCTCCCTGTCCACACATCACCCCCCGTCGGCTCACCCCCCACCCCTGCAACTCATGCCTCAGAGCCAGCCATTGCCCTCCTCGCCCGCCCAGCCCCCCGGGCTGACCCAGAGCCAGAACCTGCCCCCGCCCCCTGCCTCCCACCCCCCTACAGGCCTCCACCAGGTGGCCCCCCAACCCCCGTTTGCTCAGCACCCCTTTGTCCCTGGAGGCCCTCCTCCCATCACCCCTCCGACCTGCCCCTCCACCTCTACCCCACCGGCGGGACCTGGCACCTCGGCCCAGCCACCCTGCTCTGGTGCGGCGGCTTCAGGAGGCAGCATAGCGGGGGGGTCGTCCTGCCCACTCCCCACCGTCCAGATCAAGGAGGAGGCTCTGGACGACGCTGAGGAGCCTGAGAGCCCCCCTCCCCCACCAAGGAGCCCGTCCCCGGAGCCCACTGTGGTGGACACCCCCAGTCACGCCAGCCAGTCAGCTAGGTTCTACAAACACCTGGACCGGGGCTACAACTCGTGTGCCCGGACAGACCTGTACTTCATGCCTCTGGCCGGGTCCAAGCTGGCCAAGAAGAGGGAGGAGGCCATTGAGAAGGCCAAGCGCGAGGCTGAGCAGAAAGCCCGAGAGGAGCGAGAGCGGGAGAAGGAGAAGGAGAAGGAGCGGGAGCGGGAGCGAGAGCGGGAGCGCGAGGCAGAGCGGGCGGCTAAGGCGTCCAGCTCAGCGCATGAAGGTCGCCTCAGTGACCCACAGCTCAGTGGTCCTGGCCACATGCGGCCATCCTTCGAGCCACCACCAACCACCATTGCTGCTGTGCCCCCCTACATCGGGCCCGACACACCTGCCCTTCGGACTCTGAGCGAGTACGCCCGGCCCCACGTCATGTCGCCCACCAACCGCAACCACCCCTTCTACATGCCCCTTAACCCCACGGACCCCCTGCTGGCCTACCACATGCCTGGCCTCTACAACGTCGACCCCACCATCCGCGAGCGGGAGCTCCGGGAGCGGGAGATCCGAGAGCGGGAGATCCGAGAGCGGGAGCTGCGGGAGAGGATGAAGCCGGGCTTCGAGGTGAAGCCCCCAGAGCTGGACCCCCTGCACCCAGCCGCCAACCCCATGGAGCACTTTGCCCGGCACAGCGCCCTCACCATCCCCCCGACCGCCGGGCCCCACCCTTTTGCTTCTTTCCACCCGGGCCTGAACCCCTTGGAGAGGGAGAGACTGGCCCTGGCGGGCCCCCAGCTGCGGCCCGAGATGAGCTACCCTGACAGACTGGCAGCCGAGCGTATCCACGCAGAGCGCATGGCATCGCTGACCAGCGATCCCCTGGCCCGACTGCAGATGTTCAACGTGACTCCGCACCATCACCAGCACTCTCACATTCACTCCCACCTCCACCTCCACCAGCAGGACCCCCTCCACCAAGGTTCAGCAGGCCCCGTTCACCCGCTGGTCGACCCCCTGACTGCCGGTCCCCACCTGGCTCGCTTCCCCTACCCGCCTGGCACTCTCCCCAACCCTCTGCTTGGACAGCCCCCACACGAGCACGAGATGCTTCGCCACCCAGTTTTCGGCACCCCCTACCCCCGTGACCTGCCTGGGGCCATCCCACCCCCCATGTCAGCAGCCCACCAGCTGCAGGCCATGCATGCCCAGTCGGCCGAGCTGCAGAGACTGGCCATGGAGCAGCAGTGGCTGCATGGACACCCCCACATGCATGGTGGCCACCTACCAAGTCAGGAAGATTATTACAGTCGACTGAAGAAAGAAGGTGACAAGCAGTTATAA
Amino sequence
MFKPVKEEDDGLSGKHSMRTRRSRGSMSTLRSGRKKQPASPDGRTSPINEDIRSSGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKKTKTQEISRPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPPPPPRSPSPEPTVVDTPSHASQSARFYKHLDRGYNSCARTDLYFMPLAGSKLAKKREEAIEKAKREAEQKAREEREREKEKEKEREREREREREAERAAKASSSAHEGRLSDPQLSGPGHMRPSFEPPPTTIAAVPPYIGPDTPALRTLSEYARPHVMSPTNRNHPFYMPLNPTDPLLAYHMPGLYNVDPTIRERELREREIREREIRERELRERMKPGFEVKPPELDPLHPAANPMEHFARHSALTIPPTAGPHPFASFHPGLNPLERERLALAGPQLRPEMSYPDRLAAERIHAERMASLTSDPLARLQMFNVTPHHHQHSHIHSHLHLHQQDPLHQGSAGPVHPLVDPLTAGPHLARFPYPPGTLPNPLLGQPPHEHEMLRHPVFGTPYPRDLPGAIPPPMSAAHQLQAMHAQSAELQRLAMEQQWLHGHPHMHGGHLPSQEDYYSRLKKEGDKQL*