ENST00000456946.6 TRIM17
Information
- Transcript ID
- ENST00000456946.6
- Genome
- hg19
- Position
- chr1:228,596,401-228,604,458
- Strand
- -
- CDS length
- 1,032
- Amino acid length
- 344
- Gene symbol
- TRIM17
- Gene type
- protein-coding
- Gene description
- tripartite motif containing 17
- Gene Entrez Gene ID
- 51127
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 6 | 228,596,401 | 228,596,976 |
| 5 | 228,597,090 | 228,597,112 |
| 4 | 228,598,647 | 228,598,877 |
| 3 | 228,601,498 | 228,601,593 |
| 2 | 228,602,345 | 228,602,778 |
| 1 | 228,604,088 | 228,604,458 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 6 | CDS | 228,596,724 | 228,596,976 |
| 5 | CDS | 228,597,090 | 228,597,112 |
| 4 | CDS | 228,598,647 | 228,598,877 |
| 3 | CDS | 228,601,498 | 228,601,593 |
| 2 | CDS | 228,602,345 | 228,602,773 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr1 | 228,408,700 | 228,416,757 | Link |
CDS sequence
ATGGAGGCTGTGGAACTCGCCAGAAAACTGCAGGAGGAAGCTACGTGCTCCATCTGTCTGGATTACTTCACAGACCCTGTGATGACCACCTGTGGCCACAACTTCTGCCGAGCCTGCATCCAGCTGAGCTGGGAAAAGGCGAGGGGCAAGAAGGGGAGGCGGAAGCGGAAGGGCTCCTTCCCCTGCCCCGAGTGCAGAGAGATGTCCCCGCAGAGGAACCTGCTGCCCAACCGGCTGCTGACCAAGGTGGCCGAGATGGCGCAGCAGCATCCTGGTCTGCAGAAGCAAGACCTGTGCCAGGAGCACCACGAGCCCCTCAAGCTTTTCTGCCAGAAGGACCAGAGCCCCATCTGTGTGGTGTGCAGGGAGTCCCGGGAGCACCGGCTGCACAGGGTGCTGCCCGCCGAGGAGGCAGTGCAGGGGTACAAGTTGAAGCTGGAGGAGGACATGGAGTACCTTCGGGAGCAGATCACCAGGACAGGGAATCTGCAGGCCAGGGAGGAGCAGAGCTTAGCCGAGTGGCAGGGCAAGGTGAAGGAGCGGAGAGAACGCATTGTGCTGGAGTTTGAGAAGATGAACCTCTACCTGGTGGAAGAAGAGCAGAGGCTCCTCCAGGCTCTGGAGACGGAAGAAGAGGAGACTGCCAGCAGGCTCCGGGAGAGCGTGGCCTGCCTGGACCGGCAGGGTCACTCTCTGGAGCTGCTGCTGCTGCAGCTGGAGGAGCGGAGCACACAGGGGCCCCTCCAGATGCTGCAGGACATGAAGGAACCCCTGAGCAGGAAGAACAACGTGAGTGTGCAGTGCCCAGAGGTTGCCCCCCCAACCAGACCCAGGACTGTGTGCAGAGTTCCCGGACAGATTGAAGTGCTAAGAGGCTTTCTAGGTAAGTGGGCACCCAGGGCCAGGACCTCTGACCCAGGATCTCTTGGCGATGCCCCACTGTACCCCCTAGCCTCGGAAGCCACCAATGGGGGGGGTTCTACAAGTGCACTGCCTGGTGACGGTCACTGGCTATTCACTGTGCCTTCGTAG
Amino sequence
MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSFPCPECREMSPQRNLLPNRLLTKVAEMAQQHPGLQKQDLCQEHHEPLKLFCQKDQSPICVVCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVKERRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQLEERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRVPGQIEVLRGFLGKWAPRARTSDPGSLGDAPLYPLASEATNGGGSTSALPGDGHWLFTVPS*