ENST00000534989.1 COG2

Information
Transcript ID
ENST00000534989.1
Genome
hg19
Position
chr1:230,778,557-230,829,727
Strand
+
CDS length
2,040
Amino acid length
680
Gene symbol
COG2
Gene type
protein-coding
Gene description
component of oligomeric golgi complex 2
Gene Entrez Gene ID
22796
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 230,778,557 230,778,786
2 230,795,210 230,795,371
3 230,796,504 230,796,569
4 230,798,887 230,798,967
5 230,800,230 230,800,333
6 230,804,422 230,804,530
7 230,805,102 230,805,281
8 230,807,262 230,807,386
9 230,810,744 230,810,870
10 230,814,659 230,814,798
11 230,819,320 230,819,381
12 230,820,831 230,820,982
13 230,822,681 230,822,878
14 230,823,817 230,823,889
15 230,824,166 230,824,308
16 230,825,760 230,825,899
17 230,827,130 230,827,310
18 230,829,038 230,829,727
CDS
Exon number Type Start Stop
2 CDS 230,795,315 230,795,371
3 CDS 230,796,504 230,796,569
4 CDS 230,798,887 230,798,967
5 CDS 230,800,230 230,800,333
6 CDS 230,804,422 230,804,530
7 CDS 230,805,102 230,805,281
8 CDS 230,807,262 230,807,386
9 CDS 230,810,744 230,810,870
10 CDS 230,814,659 230,814,798
11 CDS 230,819,320 230,819,381
12 CDS 230,820,831 230,820,982
13 CDS 230,822,681 230,822,878
14 CDS 230,823,817 230,823,889
15 CDS 230,824,166 230,824,308
16 CDS 230,825,760 230,825,899
17 CDS 230,827,130 230,827,310
18 CDS 230,829,038 230,829,139
Other genome
Genome Chromosome Start End Links
hg38 chr1 230,642,811 230,693,981 Link
CDS sequence
ATGGTCGAACTCATCAACAAGGATTATGCAGATTTTGTCAATCTTTCAACAAACTTGGTTGGCATGGACAAAGCCCTCAACCAGCTTTCTGTGCCTTTGGGACAATTACGAGAAGAGGTTCTGAGCCTTAGATCGTCTGTCAGTGAAGGAATTCGGGCAGTTGATGAACGAATGTCTAAACAAGAGGACATTAGGAAAAAAAAGATGTGTGTATTGAGGCTTATACAAGTTATTCGGTCAGTTGAGAAAATTGAAAAAATCTTAAACTCTCAAAGTTCTAAAGAAACCTCTGCACTAGAAGCAAGCAGCCCCCTTTTGACTGGACAAATTTTGGAGAGAATTGCCACAGAATTTAATCAGTTACAGTTTCATGCTGTTCAAAGCAAAGGCATGCCTCTTTTGGACAAAGTAAGACCGCGTATAGCTGGCATTACAGCCATGTTACAGCAGTCACTGGAAGGTCTCCTATTAGAAGGCCTTCAGACGTCTGACGTCGATATAATACGGCACTGCTTGCGGACTTACGCCACGATTGACAAGACACGGGACGCGGAGGCCTTAGTTGGCCAAGTACTAGTGAAACCATACATAGACGAGGTGATTATAGAGCAGTTTGTTGAATCTCATCCCAATGGCCTTCAGGTCATGTATAATAAACTCCTGGAGTTTGTTCCTCACCATTGCCGCCTTCTTCGAGAAGTCACAGGAGGTGCCATCTCCAGTGAAAAAGGCAATACTGTTCCTGGATATGACTTTTTGGTGAATTCTGTTTGGCCACAAATAGTACAAGGATTAGAAGAAAAGTTACCCTCGCTTTTTAATCCTGGGAATCCCGATGCATTTCATGAGAAATATACCATAAGTATGGATTTTGTCAGAAGATTGGAACGGCAGTGTGGATCACAGGCTAGTGTAAAGAGATTAAGAGCCCATCCTGCCTATCACAGCTTCAATAAGAAGTGGAACTTGCCTGTTTATTTTCAAATAAGATTTAGAGAAATAGCGGGATCCTTAGAAGCAGCACTTACAGATGTCCTGGAAGATGCCCCAGCTGAAAGTCCGTATTGCCTTTTGGCTTCTCATAGAACTTGGAGCAGCCTTAGGAGGTGTTGGTCAGATGAGATGTTCTTGCCATTACTGGTGCATCGCCTGTGGAGACTCACTCTGCAGATTTTGGCACGATACTCTGTGTTTGTCAATGAGCTTTCACTCAGGCCCATTTCTAATGAAAGTCCCAAGGAGATCAAGAAACCTTTGGTAACTGGTAGCAAAGAACCTTCCATCACCCAAGGAAACACTGAAGACCAAGGAAGTGGTCCTTCGGAAACAAAGCCTGTGGTTTCCATTTCCCGCACTCAGCTCGTGTATGTGGTTGCAGACCTGGACAAGCTTCAGGAGCAGCTTCCAGAACTCTTGGAAATAATCAAGCCAAAACTTGAAATGATTGGCTTTAAGAATTTTTCTTCTATCTCAGCAGCCCTGGAGGACTCCCAGAGCTCTTTTTCAGCCTGTGTGCCCTCCTTGAGTAGCAAGATCATCCAGGATTTAAGTGACTCTTGCTTCGGTTTCCTAAAAAGCGCCCTGGAGGTTCCCAGGCTTTACCGAAGAACCAATAAGGAGGTCCCAACCACAGCTTCCTCCTATGTGGACAGTGCTCTGAAGCCCTTATTCCAGCTTCAGAGCGGACACAAGGATAAGCTCAAACAAGCAATAATTCAGCAGTGGCTAGAAGGCACTCTCAGTGAAAGCACTCATAAGTACTATGAAACCGTGTCAGATGTATTAAACTCTGTGAAGAAGATGGAAGAGAGCCTGAAAAGGCTGAAACAAGCCAGAAAAACCACTCCCGCCAACCCCGTCGGTCCCAGTGGTGGCATGAGCGACGACGACAAAATCAGGCTGCAGTTGGCCCTAGATGTTGAGTACTTGGGAGAGCAGATACAAAAGTTGGGACTACAAGCAAGTGACATAAAAAGCTTCTCAGCTCTCGCAGAGCTTGTTGCTGCTGCCAAGGACCAGGCAACAGCAGAGCAGCCTTAA
Amino sequence
MVELINKDYADFVNLSTNLVGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQEDIRKKKMCVLRLIQVIRSVEKIEKILNSQSSKETSALEASSPLLTGQILERIATEFNQLQFHAVQSKGMPLLDKVRPRIAGITAMLQQSLEGLLLEGLQTSDVDIIRHCLRTYATIDKTRDAEALVGQVLVKPYIDEVIIEQFVESHPNGLQVMYNKLLEFVPHHCRLLREVTGGAISSEKGNTVPGYDFLVNSVWPQIVQGLEEKLPSLFNPGNPDAFHEKYTISMDFVRRLERQCGSQASVKRLRAHPAYHSFNKKWNLPVYFQIRFREIAGSLEAALTDVLEDAPAESPYCLLASHRTWSSLRRCWSDEMFLPLLVHRLWRLTLQILARYSVFVNELSLRPISNESPKEIKKPLVTGSKEPSITQGNTEDQGSGPSETKPVVSISRTQLVYVVADLDKLQEQLPELLEIIKPKLEMIGFKNFSSISAALEDSQSSFSACVPSLSSKIIQDLSDSCFGFLKSALEVPRLYRRTNKEVPTTASSYVDSALKPLFQLQSGHKDKLKQAIIQQWLEGTLSESTHKYYETVSDVLNSVKKMEESLKRLKQARKTTPANPVGPSGGMSDDDKIRLQLALDVEYLGEQIQKLGLQASDIKSFSALAELVAAAKDQATAEQP*