ENST00000405379.6 GRHL1

Information
Transcript ID
ENST00000405379.6
Genome
hg19
Position
chr2:10,101,294-10,141,333
Strand
+
CDS length
1,290
Amino acid length
430
Gene symbol
GRHL1
Gene type
protein-coding
Gene description
grainyhead like transcription factor 1
Gene Entrez Gene ID
29841
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 10,101,294 10,101,565
2 10,104,015 10,104,171
3 10,104,364 10,104,475
4 10,105,416 10,105,510
5 10,126,252 10,126,410
6 10,130,824 10,130,875
7 10,132,135 10,132,274
8 10,133,335 10,133,372
9 10,136,007 10,136,098
10 10,136,444 10,136,529
11 10,139,093 10,139,157
12 10,140,721 10,141,333
CDS
Exon number Type Start Stop
1 CDS 10,101,387 10,101,565
2 CDS 10,104,015 10,104,171
3 CDS 10,104,364 10,104,475
4 CDS 10,105,416 10,105,510
5 CDS 10,126,252 10,126,410
6 CDS 10,130,824 10,130,875
7 CDS 10,132,135 10,132,274
8 CDS 10,133,335 10,133,372
9 CDS 10,136,007 10,136,098
10 CDS 10,136,444 10,136,529
11 CDS 10,139,093 10,139,157
12 CDS 10,140,721 10,140,835
Other genome
Genome Chromosome Start End Links
hg38 chr2 9,961,165 10,001,205 Link
CDS sequence
ATGGCTTCGCTGTGGGAATCCCCCCAGCAGTGTATCATCCTGAGCCCACTGAGCGGGTGGTGGTTTTCGATCGGAATCTCAATACTGACCAGTTCAGCTCTGGTGCTCAAGCCCCAAATGCTCAAAGGCGAACTCCAGACTCGACCTTCTCAGAGACCTTCAAGGAAGGCGTTCAGGAGGAACAACTTTGAATATACCCTAGAAGCTTCAAAATCACTTCGACAGAAGCCAGGAGACAGTACCATGACGTACCTGAACAAAGGCCAGTTCTATCCCATCACCTTGAAGGAGGTGAGCAGCAGTGAAGGAATCCATCATCCCATCAGCAAAGTTCGAAGTGTGATCATGGTGGTTTTTGCTGAAGACAAAAGCAGAGAAGATCAGTTAAGGCATTGGAAGTACTGGCACTCCCGGCAGCACACCGCTAAACAAAGATGCATTGACATAGCTGACTATAAAGAAAGCTTCAACACTATCAGTAACATCGAGGAGATTGCGTATAACGCCATTTCCTTCACATGGGACATCAACGATGAAGCAAAGGTTTTCATCTCTGTGAACTGCTTAAGCACAGATTTCTCTTCCCAGAAGGGAGTGAAGGGGTTGCCTCTTAACATTCAAGTTGATACCTATAGTTACAACAACCGCAGCAACAAGCCTGTGCACCGGGCCTACTGCCAGATCAAGGTCTTCTGTGACAAGGGAGCTGAGCGGAAAATCAGGGATGAAGAACGAAAGCAAAGCAAAAGAAAAGTTTCTGATGTTAAAGTGCCACTGCTTCCCTCTCACAAGCGAATGGATATCACAGTTTTCAAACCCTTCATTGATCTCGATACTCAGCCTGTCCTCTTCATTCCTGACGTGCACTTTGCCAACTTGCAGCGGGGCACTCATGTCCTTCCCATTGCCTCTGAAGAATTGGAGGGTGAAGGCTCTGTCTTGAAAAGGGGGCCGTACGGCACAGAAGATGACTTTGCTGTCCCTCCTTCTACCAAGCTGGCCCGGATAGAAGAACCAAAGAGAGTGCTGCTCTACGTTCGAAAGGAGTCAGAAGAAGTCTTTGATGCCCTGATGCTCAAAACCCCATCTTTGAAGGGCTTGATGGAAGCTATCTCAGACAAATACGATGTTCCCCATGACAAGATTGGGAAAATATTCAAGAAGTGTAAAAAGGGGATCCTGGTGAACATGGACGACAACATTGTGAAGCATTACTCCAATGAGGACACCTTCCAGCTGCAGATTGAAGAAGCCGGGGGGTCTTACAAGCTCACCCTGACGGAGATCTAA
Amino sequence
MASLWESPQQCIILSPLSGWWFSIGISILTSSALVLKPQMLKGELQTRPSQRPSRKAFRRNNFEYTLEASKSLRQKPGDSTMTYLNKGQFYPITLKEVSSSEGIHHPISKVRSVIMVVFAEDKSREDQLRHWKYWHSRQHTAKQRCIDIADYKESFNTISNIEEIAYNAISFTWDINDEAKVFISVNCLSTDFSSQKGVKGLPLNIQVDTYSYNNRSNKPVHRAYCQIKVFCDKGAERKIRDEERKQSKRKVSDVKVPLLPSHKRMDITVFKPFIDLDTQPVLFIPDVHFANLQRGTHVLPIASEELEGEGSVLKRGPYGTEDDFAVPPSTKLARIEEPKRVLLYVRKESEEVFDALMLKTPSLKGLMEAISDKYDVPHDKIGKIFKKCKKGILVNMDDNIVKHYSNEDTFQLQIEEAGGSYKLTLTEI*