ENST00000296098.4 TRIM54

Information
Transcript ID
ENST00000296098.4
Genome
hg19
Position
chr2:27,505,330-27,530,307
Strand
+
CDS length
1,203
Amino acid length
401
Gene symbol
TRIM54
Gene type
protein-coding
Gene description
tripartite motif containing 54
Gene Entrez Gene ID
57159
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 27,505,330 27,505,767
2 27,521,435 27,521,607
3 27,522,113 27,522,284
4 27,522,398 27,522,523
5 27,527,827 27,527,922
6 27,528,452 27,528,685
7 27,528,948 27,528,970
8 27,529,081 27,529,205
9 27,529,324 27,529,410
10 27,529,755 27,530,307
CDS
Exon number Type Start Stop
1 CDS 27,505,600 27,505,767
2 CDS 27,521,435 27,521,607
3 CDS 27,522,113 27,522,284
4 CDS 27,522,398 27,522,523
5 CDS 27,527,827 27,527,922
6 CDS 27,528,452 27,528,685
7 CDS 27,528,948 27,528,970
8 CDS 27,529,081 27,529,205
9 CDS 27,529,324 27,529,409
Other genome
Genome Chromosome Start End Links
hg38 chr2 27,282,462 27,307,439 Link
CDS sequence
ATGAACTTCACAGTGGGTTTCAAGCCGCTGCTAGGGGATGCACACAGCATGGACAACCTGGAGAAGCAGCTCATCTGCCCCATCTGCCTGGAGATGTTCTCCAAACCAGTGGTGATCCTGCCCTGCCAACACAACCTGTGCCGCAAATGTGCCAACGACGTCTTCCAGGCCTCGAATCCTCTATGGCAGTCCCGGGGCTCCACCACTGTGTCTTCAGGAGGCCGTTTCCGCTGCCCATCGTGCAGGCATGAGGTTGTCCTGGACAGACACGGTGTCTACGGCCTGCAGCGAAACCTGCTAGTGGAGAACATTATCGACATTTACAAGCAGGAGTCATCCAGGCCGCTGCACTCCAAGGCTGAGCAGCACCTCATGTGCGAGGAGCATGAAGAAGAGAAGATCAATATTTACTGCCTGAGCTGTGAGGTGCCCACCTGCTCTCTCTGCAAGGTCTTCGGTGCCCACAAGGACTGTGAGGTGGCCCCACTGCCCACCATTTACAAACGCCAGAAGAAACAGGATCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCACAAACACAACTTACTGCAGCCTTGATCTCCCGAGCTCAAGTGATCCTCCCATCTTAGCCTCGCAGAACACTAAGATTATAGATAGTGAGCTCAGCGATGGCATCGCGATGCTGGTGGCAGGCAATGACCGCGTGCAAGCAGTGATCACACAGATGGAGGAGGTGTGCCAGACTATCGAGGACAATAGCCGGAGGCAGAAGCAGTTGTTAAACCAGAGGTTTGAGAGCCTGTGCGCAGTGCTGGAGGAGCGCAAGGGTGAGCTGCTGCAGGCGCTGGCCCGGGAGCAAGAGGAGAAGCTGCAGCGCGTCCGCGGCCTCATCCGTCAGTATGGCGACCACCTGGAGGCCTCCTCTAAGCTGGTGGAGTCTGCCATCCAGTCCATGGAAGAGCCACAAATGGCGCTGTATCTCCAGCAGGCCAAGGAGCTGATCAATAAGGTCGGGGCCATGTCGAAGGTGGAGCTGGCAGGGCGGCCGGAGCCAGGCTATGAGAGCATGGAGCAATTCACCGTAAGGGTGGAGCACGTGGCCGAAATGCTGCGGACCATCGACTTCCAGCCAGGCGCTTCCGGGGAGGAAGAGGAGGTGGCCCCAGACGGAGAGGAGGGCAGCGCGGGGCCGGAGGAAGAGCGGCCGGATGGGCCTTAA
Amino sequence
MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKAEQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKKQDLTLLPRLECSGTNTTYCSLDLPSSSDPPILASQNTKIIDSELSDGIAMLVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQALAREQEEKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAGRPEPGYESMEQFTVRVEHVAEMLRTIDFQPGASGEEEEVAPDGEEGSAGPEEERPDGP*