ENST00000348227.4 WDR54
Information
- Transcript ID
- ENST00000348227.4
- Genome
- hg19
- Position
- chr2:74,648,857-74,652,882
- Strand
- +
- CDS length
- 1,005
- Amino acid length
- 335
- Gene symbol
- WDR54
- Gene type
- protein-coding
- Gene description
- WD repeat domain 54
- Gene Entrez Gene ID
- 84058
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 74,648,857 | 74,648,943 |
| 2 | 74,649,280 | 74,649,502 |
| 3 | 74,649,997 | 74,650,059 |
| 4 | 74,650,446 | 74,650,512 |
| 5 | 74,650,605 | 74,650,658 |
| 6 | 74,650,982 | 74,651,109 |
| 7 | 74,652,002 | 74,652,102 |
| 8 | 74,652,202 | 74,652,364 |
| 9 | 74,652,544 | 74,652,618 |
| 10 | 74,652,697 | 74,652,882 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 2 | CDS | 74,649,281 | 74,649,502 |
| 3 | CDS | 74,649,997 | 74,650,059 |
| 4 | CDS | 74,650,446 | 74,650,512 |
| 5 | CDS | 74,650,605 | 74,650,658 |
| 6 | CDS | 74,650,982 | 74,651,109 |
| 7 | CDS | 74,652,002 | 74,652,102 |
| 8 | CDS | 74,652,202 | 74,652,364 |
| 9 | CDS | 74,652,544 | 74,652,618 |
| 10 | CDS | 74,652,697 | 74,652,828 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr2 | 74,421,730 | 74,425,755 | Link |
CDS sequence
ATGTTCCGCTGGGAGCGCTCCATTCCCCTGCGAGGCTCGGCCGCCGCCCTGTGCAACAACCTCAGTGTGCTGCAGCTGCCGGCTCGCAACCTCACGTATTTTGGCGTGGTTCATGGACCAAGCGCCCAGCTTCTCAGCGCTGCTCCTGAGGGTGTGCCCTTGGCCCAGCGCCAGCTCCACGCTAAGGAGGGTGCTGGAGTGAGTCCCCCACTTATCACTCAGGTCCACTGGTGTGTCCTCCCCTTCCGAGTGCTGCTGGTACTCACCTCACATCGAGGAATACAGATGTACGAGTCCAATGGCTACACCATGGTCTACTGGCATGCACTGGACTCTGGAGATGCCTCCCCAGTACAGGCTGTGTTTGCCCGGGGAATTGCTGCCAGTGGCCACTTCATCTGTGTGGGAACGTGGTCAGGCCGGGTGCTGGTGTTTGACATCCCAGCAAAGGGTCCCAACATTGTACTGAGCGAGGAGCTGGCTGGGCACCAGATGCCAATCACAGACATTGCCACCGAGCCTGCCCAGGGACAGGATTGTGTGGCTGACATGGTGACGGCAGATGACTCAGGCTTGCTGTGTGTCTGGCGGTCAGGGCCAGAATTCACATTATTGACCCGCATTCCAGGATTTGGAGTTCCGTGCCCCTCTGTGCAGCTGTGGCAGGGGATCATAGCAGCAGGCTATGGGAACGGACAAGTGCATCTATATGAGGCCACTACAGGAAATCTACATGTCCAGATCAATGCCCATGCCCGGGCCATCTGCGCCCTGGACCTGGCTTCTGAGGTGGGCAAGCTACTCTCTGCAGGTGAGGACACCTTTGTGCATATCTGGAAGCTGAGCAGAAACCCAGAGAGTGGCTACATTGAGGTGGAACACTGTCATGGTGAGTGTGTCGCCGACACCCAGCTGTGTGGTGCTCGATTTTGTGATTCCTCAGGCAACTCCTTTGCTGTGACTGGCTATGACCTTGCGGAGATCCGGAGATTCAGCAGTGTGTGA
Amino sequence
MFRWERSIPLRGSAAALCNNLSVLQLPARNLTYFGVVHGPSAQLLSAAPEGVPLAQRQLHAKEGAGVSPPLITQVHWCVLPFRVLLVLTSHRGIQMYESNGYTMVYWHALDSGDASPVQAVFARGIAASGHFICVGTWSGRVLVFDIPAKGPNIVLSEELAGHQMPITDIATEPAQGQDCVADMVTADDSGLLCVWRSGPEFTLLTRIPGFGVPCPSVQLWQGIIAAGYGNGQVHLYEATTGNLHVQINAHARAICALDLASEVGKLLSAGEDTFVHIWKLSRNPESGYIEVEHCHGECVADTQLCGARFCDSSGNSFAVTGYDLAEIRRFSSV*