ENST00000541687.5 GCFC2
Information
- Transcript ID
- ENST00000541687.5
- Genome
- hg19
- Position
- chr2:75,889,834-75,938,111
- Strand
- -
- CDS length
- 765
- Amino acid length
- 255
- Gene symbol
- GCFC2
- Gene type
- protein-coding
- Gene description
- GC-rich sequence DNA-binding factor 2
- Gene Entrez Gene ID
- 6936
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 16 | 75,889,834 | 75,891,909 |
| 15 | 75,893,055 | 75,893,179 |
| 14 | 75,897,264 | 75,897,410 |
| 13 | 75,899,076 | 75,899,142 |
| 12 | 75,900,570 | 75,900,646 |
| 11 | 75,907,319 | 75,907,440 |
| 10 | 75,914,953 | 75,915,103 |
| 9 | 75,916,152 | 75,916,351 |
| 8 | 75,917,095 | 75,917,207 |
| 7 | 75,917,764 | 75,917,845 |
| 6 | 75,919,103 | 75,919,226 |
| 5 | 75,921,367 | 75,921,553 |
| 4 | 75,928,316 | 75,928,413 |
| 3 | 75,929,325 | 75,929,549 |
| 2 | 75,933,649 | 75,933,777 |
| 1 | 75,937,717 | 75,938,111 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 5 | CDS | 75,921,506 | 75,921,553 |
| 4 | CDS | 75,928,316 | 75,928,413 |
| 3 | CDS | 75,929,325 | 75,929,549 |
| 2 | CDS | 75,933,649 | 75,933,777 |
| 1 | CDS | 75,937,717 | 75,937,981 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr2 | 75,662,708 | 75,710,985 | Link |
CDS sequence
ATGGCTCACAGGCCGAAAAGGACTTTTCGGCAGCGCGCGGCTGATTCCAGCGACAGCGATGGCGCCGAGGAGTCGCCTGCTGAGCCTGGGGCGCCGAGGGAACTTCCGGTCCCGGGTTCTGCGGAGGAAGAGCCGCCCTCTGGAGGAGGCCGCGCGCAGGTGGCGGGACTGCCCCACCGGGTTCGGGGCCCTCGTGGCCGGGGCCGGGTCTGGGCGAGCTCCCGGCGTGCCACCAAAGCGGCTCCCCGCGCGGACGAAGGCTCAGAATCCAGAACCCTTGATGTGTCCACAGATGAAGAGGATAAAATACATCACTCCTCAGAAAGTAAGGATGATCAGGGTTTGTCTTCTGACAGTTCTAGCTCTCTTGGAGAAAAAGAACTTTCATCAACAGTTAAGATCCCAGATGCAGCTTTTATTCAGGCAGCCCGCAGAAAACGTGAATTGGCCAGGGCCCAAGATGACTATATTTCTTTGGATGTACAACATACCTCCTCCATCTCTGGTATGAAGAGAGAGAGCGAAGATGACCCTGAGAGTGAGCCTGATGACCATGAAAAGAGAATACCATTTACTCTAAGACCTCAAACACTTAGACAAAGGATGGCTGAGGAATCAATAAGCAGAAATGAAGAAACAAGTGAAGAAAGTCAGGAAGATGAAAAGCAAGATACTTGGGAACAACAGCAAATGAGGAAAGCAGTTAAAATCATAGAGATTAACATTACTACAGGAAACTCACCGCTCACACCTGAGGGAGTATGA
Amino sequence
MAHRPKRTFRQRAADSSDSDGAEESPAEPGAPRELPVPGSAEEEPPSGGGRAQVAGLPHRVRGPRGRGRVWASSRRATKAAPRADEGSESRTLDVSTDEEDKIHHSSESKDDQGLSSDSSSSLGEKELSSTVKIPDAAFIQAARRKRELARAQDDYISLDVQHTSSISGMKRESEDDPESEPDDHEKRIPFTLRPQTLRQRMAEESISRNEETSEESQEDEKQDTWEQQQMRKAVKIIEINITTGNSPLTPEGV*