ENST00000444564.2 SMYD1

Information
Transcript ID
ENST00000444564.2
Genome
hg19
Position
chr2:88,367,344-88,410,373
Strand
+
CDS length
1,434
Amino acid length
478
Gene symbol
SMYD1
Gene type
protein-coding
Gene description
SET and MYND domain containing 1
Gene Entrez Gene ID
150572
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 88,367,344 88,367,520
2 88,383,835 88,384,011
3 88,387,381 88,387,594
4 88,390,531 88,390,661
5 88,396,114 88,396,303
6 88,402,577 88,402,669
7 88,405,844 88,406,007
8 88,407,890 88,408,058
9 88,409,873 88,410,373
CDS
Exon number Type Start Stop
1 CDS 88,367,384 88,367,520
2 CDS 88,383,835 88,384,011
3 CDS 88,387,381 88,387,594
4 CDS 88,390,531 88,390,661
5 CDS 88,396,114 88,396,303
6 CDS 88,402,577 88,402,669
7 CDS 88,405,844 88,406,007
8 CDS 88,407,890 88,408,058
9 CDS 88,409,873 88,410,031
Other genome
Genome Chromosome Start End Links
hg38 chr2 88,067,825 88,110,854 Link
CDS sequence
ATGACAATAGGGAGAATGGAGAACGTGGAGGTCTTCACCGCTGAGGGCAAAGGAAGGGGTCTGAAGGCCACCAAGGAGTTCTGGGCTGCAGATATCATCTTTGCTGAGCGGGCTTATTCCGCAGTGGTTTTTGACAGCCTTGTTAATTTTGTGTGCCACACCTGCTTCAAGAGGCAGGAGAAGCTCCATCGCTGTGGGCAGTGCAAGTTTGCCCATTACTGCGACCGCACCTGCCAGAAGGATGCTTGGCTGAACCACAAGAATGAATGTTCGGCCATCAAGAGATATGGGAAGGTGCCCAATGAGAACATCAGGCTGGCGGCGCGCATCATGTGGCGGGTGGAGAGAGAAGGCACCGGGCTCACGGAGGGCTGCCTGGTGTCCGTGGACGACTTGCAGAACCACGTGGAGCACTTTGGGGAGGAGGAGCAGAAGGACCTGCGGGTGGACGTGGACACATTCTTGCAGTACTGGCCGCCGCAGAGCCAGCAGTTCAGCATGCAGTACATCTCGCACATCTTCGGAGTGATTAACTGCAACGGTTTTACTCTCAGTGATCAGAGAGGCCTGCAGGCCGTGGGCGTAGGCATCTTCCCCAACCTGGGCCTGGTGAACCATGACTGTTGGCCCAACTGTACTGTCATATTTAACAATGGCAAAATTGAGCTCCGGGCCCTAGGCAAGATCTCAGAAGGAGAGGAGCTGACTGTGTCCTATATTGACTTCCTCAACGTTAGTGAAGAACGCAAGAGGCAGCTGAAGAAGCAGTACTACTTTGACTGCACATGTGAACACTGCCAGAAAAAACTGAAGGATGACCTCTTCCTGGGGGTGAAAGACAACCCCAAGCCCTCTCAGGAAGTGGTGAAGGAGATGATACAATTCTCCAAGGATACATTGGAAAAGATAGACAAGGCTCGTTCCGAGGGTTTGTATCATGAGGTTGTGAAATTATGCCGGGAGTGCCTGGAGAAGCAGGAGCCAGTGTTTGCTGACACCAACATCTACATGCTGCGGATGCTGAGCATTGTTTCGGAGGTCCTTTCCTACCTCCAGGCCTTTGAGGAGGCCTCGTTCTATGCCAGGAGGATGGTGGACGGCTATATGAAGCTCTACCACCCCAACAATGCCCAACTGGGCATGGCCGTGATGCGGGCAGGGCTGACCAACTGGCATGCTGGTAACATTGAGGTGGGGCACGGGATGATCTGCAAAGCCTATGCCATTCTCCTGGTGACACACGGACCCTCCCACCCCATCACTAAGGACTTAGAGGCCATGCGGGTGCAGACGGAGATGGAGCTACGCATGTTCCGCCAGAACGAATTCATGTACTACAAGATGCGCGAGGCTGCCCTGAACAACCAGCCCATGCAGGTCATGGCCGAGCCCAGCAATGAGCCATCCCCAGCTCTGTTCCACAAGAAGCAATGA
Amino sequence
MTIGRMENVEVFTAEGKGRGLKATKEFWAADIIFAERAYSAVVFDSLVNFVCHTCFKRQEKLHRCGQCKFAHYCDRTCQKDAWLNHKNECSAIKRYGKVPNENIRLAARIMWRVEREGTGLTEGCLVSVDDLQNHVEHFGEEEQKDLRVDVDTFLQYWPPQSQQFSMQYISHIFGVINCNGFTLSDQRGLQAVGVGIFPNLGLVNHDCWPNCTVIFNNGKIELRALGKISEGEELTVSYIDFLNVSEERKRQLKKQYYFDCTCEHCQKKLKDDLFLGVKDNPKPSQEVVKEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNIYMLRMLSIVSEVLSYLQAFEEASFYARRMVDGYMKLYHPNNAQLGMAVMRAGLTNWHAGNIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRVQTEMELRMFRQNEFMYYKMREAALNNQPMQVMAEPSNEPSPALFHKKQ*