ENST00000335247.11 CYP27C1
Information
- Transcript ID
- ENST00000335247.11
- Genome
- hg19
- Position
- chr2:127,941,696-127,963,343
- Strand
- -
- CDS length
- 1,119
- Amino acid length
- 373
- Gene symbol
- CYP27C1
- Gene type
- protein-coding
- Gene description
- cytochrome P450 family 27 subfamily C member 1
- Gene Entrez Gene ID
- 339761
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 8 | 127,941,696 | 127,944,963 |
| 7 | 127,950,670 | 127,950,873 |
| 6 | 127,951,365 | 127,951,443 |
| 5 | 127,952,911 | 127,953,077 |
| 4 | 127,956,952 | 127,957,115 |
| 3 | 127,958,698 | 127,958,907 |
| 2 | 127,960,948 | 127,961,147 |
| 1 | 127,963,235 | 127,963,343 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 8 | CDS | 127,944,847 | 127,944,963 |
| 7 | CDS | 127,950,670 | 127,950,873 |
| 6 | CDS | 127,951,365 | 127,951,443 |
| 5 | CDS | 127,952,911 | 127,953,077 |
| 4 | CDS | 127,956,952 | 127,957,115 |
| 3 | CDS | 127,958,698 | 127,958,907 |
| 2 | CDS | 127,960,948 | 127,961,125 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr2 | 127,184,120 | 127,205,767 | Link |
CDS sequence
ATGAGAAGCGTATTGAGACAAAGAATTCTGAAACCGAAAGATGTGGCCATTTATTCTGGAGAAGTCAACCAAGTTATTGCTGACTTAATTAAAAGAATCTACCTCCTCAGGAGCCAGGCAGAAGATGGAGAAACCGTGACCAATGTCAATGATCTTTTCTTCAAATATTCAATGGAAGGAGTGGCCACCATCCTTTATGAGAGTCGTTTGGGCTGCCTGGAAAACAGCATCCCACAGCTGACTGTGGAATACATCGAGGCCCTGGAGCTCATGTTTAGCATGTTCAAGACCTCCATGTATGCAGGCGCCATCCCCAGATGGCTTCGCCCCTTCATCCCAAAGCCCTGGCGGGAATTCTGCAGGTCCTGGGATGGACTCTTCAAATTCAGCCAAATTCATGTTGACAACAAGTTGAGGGACATACAGTACCAAATGGACCGAGGCCGGAGGGTGAGCGGGGGACTTCTCACATACCTCTTCCTTAGCCAGGCTCTGACGCTGCAGGAGATCTACGCCAACGTGACTGAGATGCTGCTGGCCGGCGTCGACACGACGTCCTTCACCTTGTCTTGGACTGTGTACCTCCTGGCAAGGCACCCAGAAGTGCAGCAGACGGTGTACCGGGAGATTGTGAAGAATTTAGGGGAAAGGCATGTTCCAACTGCAGCTGATGTCCCCAAGGTCCCGCTGGTCAGAGCTCTCCTTAAGGAAACCCTGAGGCTGTTTCCAGTGCTGCCAGGGAACGGCCGGGTCACCCAGGAAGACCTGGTTATTGGCGGGTATCTGATTCCGAAAGGCACCCAGCTGGCCCTTTGCCACTATGCCACATCGTACCAGGATGAGAACTTCCCTCGGGCCAAGGAGTTCCGGCCTGAGCGCTGGCTGCGGAAAGGAGACTTAGATAGAGTTGACAATTTTGGATCCATCCCCTTTGGTCATGGGGTTCGCAGCTGCATAGGGCGGAGAATTGCAGAACTGGAGATTCACCTCGTCGTGATCCAGTTGCTTCAACATTTTGAGATCAAAACATCTTCTCAGACCAATGCTGTTCATGCAAAAACCCACGGGCTCCTGACGCCAGGGGGGCCCATCCACGTGCGATTTGTTAACAGAAAGTAA
Amino sequence
MRSVLRQRILKPKDVAIYSGEVNQVIADLIKRIYLLRSQAEDGETVTNVNDLFFKYSMEGVATILYESRLGCLENSIPQLTVEYIEALELMFSMFKTSMYAGAIPRWLRPFIPKPWREFCRSWDGLFKFSQIHVDNKLRDIQYQMDRGRRVSGGLLTYLFLSQALTLQEIYANVTEMLLAGVDTTSFTLSWTVYLLARHPEVQQTVYREIVKNLGERHVPTAADVPKVPLVRALLKETLRLFPVLPGNGRVTQEDLVIGGYLIPKGTQLALCHYATSYQDENFPRAKEFRPERWLRKGDLDRVDNFGSIPFGHGVRSCIGRRIAELEIHLVVIQLLQHFEIKTSSQTNAVHAKTHGLLTPGGPIHVRFVNRK*