ENST00000282074.7 SPC25
Information
- Transcript ID
- ENST00000282074.7
- Genome
- hg19
- Position
- chr2:169,727,401-169,746,940
- Strand
- -
- CDS length
- 675
- Amino acid length
- 225
- Gene symbol
- SPC25
- Gene type
- protein-coding
- Gene description
- SPC25 component of NDC80 kinetochore complex
- Gene Entrez Gene ID
- 57405
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 7 | 169,727,401 | 169,728,065 |
| 6 | 169,730,095 | 169,730,193 |
| 5 | 169,732,582 | 169,732,686 |
| 4 | 169,733,748 | 169,733,894 |
| 3 | 169,745,736 | 169,745,801 |
| 2 | 169,745,897 | 169,746,043 |
| 1 | 169,746,828 | 169,746,940 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 7 | CDS | 169,727,941 | 169,728,065 |
| 6 | CDS | 169,730,095 | 169,730,193 |
| 5 | CDS | 169,732,582 | 169,732,686 |
| 4 | CDS | 169,733,748 | 169,733,894 |
| 3 | CDS | 169,745,736 | 169,745,801 |
| 2 | CDS | 169,745,897 | 169,746,029 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr2 | 168,870,891 | 168,890,430 | Link |
CDS sequence
ATGGTAGAGGACGAACTGGCACTTTTCGATAAAAGCATAAATGAATTTTGGAATAAATTCAAAAGTACGGACACCTCCTGTCAGATGGCGGGACTAAGAGATACCTACAAGGATTCCATCAAAGCATTTGCAGAAAAGCTGTCTGTGAAATTAAAGGAAGAAGAACGAATGGTTGAGATGTTTCTGGAATATCAAAATCAGATCAGCAGGCAAAATAAGCTCATTCAAGAAAAAAAGGATAACTTGTTAAAATTGATTGCTGAAGTAAAAGGCAAAAAGCAGGAATTGGAAGTACTGACTGCAAATATCCAGGATCTTAAGGAAGAATATTCTAGGAAGAAGGAAACTATTTCTACTGCTAATAAAGCGAATGCAGAGAGGTTGAAAAGGCTGCAGAAATCTGCAGACTTGTATAAAGATCGACTTGGACTAGAAATTCGAAAAATTTATGGTGAGAAATTGCAGTTTATTTTCACTAATATTGACCCTAAGAATCCTGAGAGCCCATTTATGTTTTCCTTACATCTCAATGAAGCAAGGGACTATGAAGTGTCAGATAGTGCCCCTCATCTTGAGGGCCTAGCAGAATTTCAAGAGAATGTAAGGAAGACCAACAATTTTTCAGCTTTTCTTGCCAATGTTCGGAAAGCTTTTACTGCCACGGTTTATAATTAA
Amino sequence
MVEDELALFDKSINEFWNKFKSTDTSCQMAGLRDTYKDSIKAFAEKLSVKLKEEERMVEMFLEYQNQISRQNKLIQEKKDNLLKLIAEVKGKKQELEVLTANIQDLKEEYSRKKETISTANKANAERLKRLQKSADLYKDRLGLEIRKIYGEKLQFIFTNIDPKNPESPFMFSLHLNEARDYEVSDSAPHLEGLAEFQENVRKTNNFSAFLANVRKAFTATVYN*