ENST00000544803.5 LNPK

Information
Transcript ID
ENST00000544803.5
Genome
hg19
Position
chr2:176,788,625-176,867,022
Strand
-
CDS length
1,380
Amino acid length
460
Gene symbol
LNPK
Gene type
protein-coding
Gene description
lunapark, ER junction formation factor
Gene Entrez Gene ID
80856
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
14 176,788,625 176,794,927
13 176,802,072 176,802,242
12 176,803,041 176,803,111
11 176,804,280 176,804,385
10 176,805,716 176,805,808
9 176,812,208 176,812,420
8 176,829,100 176,829,151
7 176,829,234 176,829,317
6 176,835,492 176,835,532
5 176,844,538 176,844,596
4 176,856,959 176,857,146
3 176,857,910 176,857,951
2 176,860,286 176,860,374
1 176,866,888 176,867,022
CDS
Exon number Type Start Stop
14 CDS 176,794,695 176,794,927
13 CDS 176,802,072 176,802,242
12 CDS 176,803,041 176,803,111
11 CDS 176,804,280 176,804,385
10 CDS 176,805,716 176,805,808
9 CDS 176,812,208 176,812,420
8 CDS 176,829,100 176,829,151
7 CDS 176,829,234 176,829,317
6 CDS 176,835,492 176,835,532
5 CDS 176,844,538 176,844,596
4 CDS 176,856,959 176,857,146
3 CDS 176,857,910 176,857,951
2 CDS 176,860,286 176,860,312
Other genome
Genome Chromosome Start End Links
hg38 chr2 175,923,897 176,002,294 Link
CDS sequence
ATGGGTGGATTATTTTCTCGATGGAGGACAAAACCTTCAACTGTAGAAGTTCTAGAAAGTATAGATAAGGAAATTCAAGCATTGGAAGAATTTAGGGAAAAAAATCAGAGATTACAAAAATTATGGGTTGGAAGATTAATTCTGTATTCCTCAGTTCTCTATCTGTTTACATGCTTAATTGTATATTTGTGGTATCTTCCTGATGAATTTACAGCAAGACTTGCCATGACACTCCCATTTTTTGCTTTTCCATTGATCATCTGGAGCATAAGAACAGTAATTATTTTCTTCTTTTCCAAGAGAACAGAAAGAAATAATGAAGCATTGGATGATTTAAAATCCCAGAGGAAAAAAATACTTGAAGAAGTCATGGAAAAAGAAACTTACAAGACGGCTAAATTAATTCTTGAAAGGTTTGATCCGGACTCAAAGAAAGCAAAGGAGTGTGAGCCGCCATCTGCTGGAGCAGCTGTAACTGCAAGACCTGGACAAGAGATTCGTCAGCGAACTGCAGCTCAAAGAAACCTTTCTCCAACACCAGCAAGCCCTAACCAGGGCCCTCCTCCACAAGTTCCAGTATCTCCTGGACCACCAAAGGACAGTTCTGCCCCTGGTGGACCCCCAGAAAGGACTGTTACTCCAGCCCTATCATCAAATGTGTTACCAAGACATCTTGGATCCCCTGCTACTTCAGTGCCTGGAATGGAGATGGGGCTTCCTCATATTGCCCAGGCTGGTCTTGAACACCTGAGCTCAAGTGATCTGTCTACCTCGACCTCTCAAAGTGCTGGGATTACAGGTCTTCATCCTCCAGGTCCACCTTTAGCAAGACCTATTCTCCCCCGAGAACGAGGTGCTTTGGATAGAATTGTTGAATATTTGGTTGGTGATGGTCCACAAAACAGGTATGCACTTATATGTCAGCAGTGTTTTTCTCATAATGGCATGGCTTTGAAGGAAGAATTTGAATACATTGCTTTTCGATGTGCCTACTGTTTTTTCTTGAACCCTGCAAGAAAAACCAGACCTCAGGCTCCAAGACTTCCTGAGTTTAGTTTTGAGAAGAGGCAGGTGGTGGAAGGTTCAAGTTCAGTTGGTCCCTTGCCATCAGGAAGTGTGCTTTCATCAGACAACCAGTTTAATGAAGAATCTTTAGAACACGATGTTCTTGATGATAATACAGAGCAGACAGATGACAAAATACCAGCTACAGAACAGACAAACCAAGTGATTGAAAAAGCATCTGACTCAGAGGAACCAGAGGAGAAACAAGAGACTGAGAATGAGGAAGCCTCAGTGATTGAAACCAACTCCACAGTTCCTGGAGCTGATTCTATTCCTGATCCTGAACTAAGTGGAGAATCTTTGACGGCAGAGTAG
Amino sequence
MGGLFSRWRTKPSTVEVLESIDKEIQALEEFREKNQRLQKLWVGRLILYSSVLYLFTCLIVYLWYLPDEFTARLAMTLPFFAFPLIIWSIRTVIIFFFSKRTERNNEALDDLKSQRKKILEEVMEKETYKTAKLILERFDPDSKKAKECEPPSAGAAVTARPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATSVPGMEMGLPHIAQAGLEHLSSSDLSTSTSQSAGITGLHPPGPPLARPILPRERGALDRIVEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYIAFRCAYCFFLNPARKTRPQAPRLPEFSFEKRQVVEGSSSVGPLPSGSVLSSDNQFNEESLEHDVLDDNTEQTDDKIPATEQTNQVIEKASDSEEPEEKQETENEEASVIETNSTVPGADSIPDPELSGESLTAE*