ENST00000409295.5 COPS7B
Information
- Transcript ID
- ENST00000409295.5
- Genome
- hg19
- Position
- chr2:232,646,388-232,672,525
- Strand
- +
- CDS length
- 693
- Amino acid length
- 231
- Gene symbol
- COPS7B
- Gene type
- protein-coding
- Gene description
- COP9 signalosome subunit 7B
- Gene Entrez Gene ID
- 64708
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 232,646,388 | 232,646,593 |
| 2 | 232,656,443 | 232,656,518 |
| 3 | 232,658,973 | 232,659,061 |
| 4 | 232,660,816 | 232,661,018 |
| 5 | 232,663,569 | 232,663,674 |
| 6 | 232,672,197 | 232,672,525 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 232,646,534 | 232,646,593 |
| 2 | CDS | 232,656,443 | 232,656,518 |
| 3 | CDS | 232,658,973 | 232,659,061 |
| 4 | CDS | 232,660,816 | 232,661,018 |
| 5 | CDS | 232,663,569 | 232,663,674 |
| 6 | CDS | 232,672,197 | 232,672,355 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr2 | 231,781,678 | 231,807,815 | Link |
CDS sequence
ATGACAGCCCGCAGAGAGTTAACTTCTGTTTACATGGAACTCAGACATCTGCAAATCATGCTTGCGGAAGGAGCTAATGCTGCTTATTTGCAGTTGTTGAACCTGTTTGCCTATGGGACATACCCAGATTACATAGCCAACAAGGAGAGCCTGCCAGAACTGAGCACAGCTCAGCAGAACAAGCTGAAGCATCTTACCATCGTGAGCTTGGCATCAAGAATGAAGTGTATCCCCTACTCCGTGTTGCTGAAAGACCTGGAGATGCGGAATCTCCGGGAACTAGAAGACCTTATCATTGAGGCTGTCTACACTGACATCATCCAGGGCAAGCTGGACCAGCGAAACCAGCTGCTGGAAGTGGATTTCTGCATTGGCCGTGACATCCGAAAGAAGGATATCAATAATATTGTCAAGACCCTGCATGAATGGTGTGATGGCTGTGAAGCAGTTCTACTGGGCATCGAGCAGCAAGTTCTGAGAGCCAACCAGTACAAAGAGAACCACAACCGAACTCAGCAGCAGGTAGAAGCAGAGGTTACCAACATCAAGAAGACACTCAAAGCCACCGCATCCTCCTCGGCTCAGGAGATGGAGCAGCAGCTGGCTGAACGGGAGTGTCCCCCTCACGCTGAGCAGAGGCAGCCCACCAAGAAGATGTCCAAAGTGAAAGGTCTGGTCTCCAGCCGCCACTAG
Amino sequence
MTARRELTSVYMELRHLQIMLAEGANAAYLQLLNLFAYGTYPDYIANKESLPELSTAQQNKLKHLTIVSLASRMKCIPYSVLLKDLEMRNLRELEDLIIEAVYTDIIQGKLDQRNQLLEVDFCIGRDIRKKDINNIVKTLHEWCDGCEAVLLGIEQQVLRANQYKENHNRTQQQVEAEVTNIKKTLKATASSSAQEMEQQLAERECPPHAEQRQPTKKMSKVKGLVSSRH*