ENST00000424438.5 RPUSD3

Information
Transcript ID
ENST00000424438.5
Genome
hg19
Position
chr3:9,879,704-9,885,626
Strand
-
CDS length
639
Amino acid length
213
Gene symbol
RPUSD3
Gene type
protein-coding
Gene description
RNA pseudouridine synthase D3
Gene Entrez Gene ID
285367
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
8 9,879,704 9,879,891
7 9,881,868 9,881,991
6 9,882,216 9,882,300
5 9,882,382 9,882,489
4 9,883,667 9,883,766
3 9,883,883 9,883,927
2 9,885,149 9,885,285
1 9,885,409 9,885,626
CDS
Exon number Type Start Stop
8 CDS 9,879,881 9,879,891
7 CDS 9,881,868 9,881,991
6 CDS 9,882,216 9,882,300
5 CDS 9,882,382 9,882,489
4 CDS 9,883,667 9,883,766
3 CDS 9,883,883 9,883,927
2 CDS 9,885,149 9,885,285
1 CDS 9,885,409 9,885,437
Other genome
Genome Chromosome Start End Links
hg38 chr3 9,838,020 9,843,942 Link
CDS sequence
ATGGGACCGGTCGTACCTGAATTTTCGAGGCATCAGAGGCAACCCCGCGGCTCCTGCCAACGGTCGGGGCCCCTCGGGGACCAGCCCTTCGCGGGGCTGCTGCCAAAAAACCTCAGTCGGGAGGAGCTGGTTGATGCGCTGCGGGCAGCCGTGGTGGACCGGAAAGGACCTCTAGTGACGTTGAACAAGCCACAGGGTCTACCAGTGACAGGAAAACCAGGAGAGCTGACGTTGTTCTCAGTGCTGCCAGAGCTGAGCCAGTCCCTAGGGCTCAGGGAGCAGGAGCTTCAGGTTGTCCGAGCATCTGGGAAAGAAAGCTCTGGGCTTGTACTCCTCTCCAGCTGTCCCCAGACAGCTAGTCGCCTCCAGAAGTACTTCACCCATGCACGGAGAGCCCAAAGGCCCACAGCCACCTACTGTGCTGTCACTGATGGGATCCCAGCTGCTTCTGAGGGGAAGATCCAGGCTGCCCTGAAACTGGAACACATTGATGGGGTCAATCTCACAGTTCCAGTGAAGGCCCCATCCCGAAAGGACATCCTGGAAGGTGTCAAGAAGACTCTCAGTCACTTTCGTGTGGTAGCCACAGGCTCTGGCTGTGCCCTGGTCCAGCTGCAGCCACTGACAGGTCCTGGATGA
Amino sequence
MGPVVPEFSRHQRQPRGSCQRSGPLGDQPFAGLLPKNLSREELVDALRAAVVDRKGPLVTLNKPQGLPVTGKPGELTLFSVLPELSQSLGLREQELQVVRASGKESSGLVLLSSCPQTASRLQKYFTHARRAQRPTATYCAVTDGIPAASEGKIQAALKLEHIDGVNLTVPVKAPSRKDILEGVKKTLSHFRVVATGSGCALVQLQPLTGPG*