ENST00000273598.8 NICN1

Information
Transcript ID
ENST00000273598.8
Genome
hg19
Position
chr3:49,459,766-49,466,757
Strand
-
CDS length
642
Amino acid length
214
Gene symbol
NICN1
Gene type
protein-coding
Gene description
nicolin 1, tubulin polyglutamylase complex subunit
Gene Entrez Gene ID
84276
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
6 49,459,766 49,462,307
5 49,462,382 49,462,486
4 49,462,800 49,462,871
3 49,463,316 49,463,429
2 49,463,685 49,463,861
1 49,466,541 49,466,757
CDS
Exon number Type Start Stop
6 CDS 49,462,266 49,462,307
5 CDS 49,462,382 49,462,486
4 CDS 49,462,800 49,462,871
3 CDS 49,463,316 49,463,429
2 CDS 49,463,685 49,463,861
1 CDS 49,466,541 49,466,672
Other genome
Genome Chromosome Start End Links
hg38 chr3 49,422,333 49,429,324 Link
CDS sequence
ATGTCCCGCGTTTTGGTGCCTTGCCATGTGAAAGGCTCCGTAGCCCTCCAGGTGGGCGACGTGCGGACCTCCCAAGGCCGGCCTGGCGTGCTGGTCATCGATGTCACCTTCCCCAGCGTCGCTCCCTTCGAGTTGCAGGAAATCACGTTTAAGAATTACTACACAGCTTTTTTGAGCATCCGTGTCCGTCAGTACACCTCAGCACACACACCTGCCAAGTGGGTGACCTGCCTGCGGGACTACTGCCTAATGCCTGACCCACACAGTGAGGAGGGAGCCCAGGAGTATGTATCGCTGTTCAAGCATCAGATGCTGTGTGACATGGCTAGAATATCGGAGCTACGCCTGATTCTGCGGCAGCCATCACCACTGTGGCTGTCTTTCACAGTGGAGGAGCTGCAGATCTATCAGCAGGGACCAAAGAGCCCCTCCGTGACCTTTCCCAAGTGGCTCTCCCACCCAGTGCCCTGTGAGCAACCTGCACTCCTCCGTGAGGGTCTCCCAGACCCCAGCAGGGTATCCTCCGAGGTGCAGCAGATGTGGGCACTGACAGAGATGATCCGGGCCAGTCACACCTCCGCAAGGATCGGCCGCTTTGATGTGGATGGCTGTTATGACCTGAACTTGCTCTCCTACACTTGA
Amino sequence
MSRVLVPCHVKGSVALQVGDVRTSQGRPGVLVIDVTFPSVAPFELQEITFKNYYTAFLSIRVRQYTSAHTPAKWVTCLRDYCLMPDPHSEEGAQEYVSLFKHQMLCDMARISELRLILRQPSPLWLSFTVEELQIYQQGPKSPSVTFPKWLSHPVPCEQPALLREGLPDPSRVSSEVQQMWALTEMIRASHTSARIGRFDVDGCYDLNLLSYT*